RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CYTH4Q9UIA0 394 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 TMCO1Q9UM00 188 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 TMCC1O94876 653 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 OATP04181 439 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RALBP11234 206 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CPOXP36551 454 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 GRIA2P42262 883 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 MSLNQ13421 630 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RAB6CQ53S08 254 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RNF157Q96PX1 679 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SERPINI1Q99574 410 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RAB6CQ9H0N0 254 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RIPK3Q9Y572 518 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 WDR27A2RRH5 827 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 TTLL13PA6NNM8 815 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SUPT20HL2P0C7V6 817 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SRGAP2BP0DMP2 458 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ENO3P13929 434 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 GRIA1P42261 906 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 FLOT2Q14254 428 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PPP2R5DQ14738 602 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SUPT20HL1Q3ZLR7 823 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 CAND1Q86VP6 1230 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 MIPOL1Q8TD10 442 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 DCUN1D1Q96GG9 259 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PEBP4Q96S96 227 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 EBNA1BP2Q99848 306 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 FAM96AQ9H5X1 160 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PCDHGC3Q9UN70 934 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SNNO75324 88 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ITGA2BP08514 1039 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 KCNA2P16389 499 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 TCN1P20061 433 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 MX2P20592 715 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SAT1P21673 171 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 TEDDM1Q5T9Z0 273 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 POTEAQ6S8J7 498 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PHTF2Q8N3S3 785 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 FBXW8Q8N3Y1 598 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PLD5Q8N7P1 536 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 FNIP1Q8TF40 1166 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 APBB2Q92870 758 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 DHX35Q9H5Z1 703 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 COX4I1P13073 169 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PRKCHP24723 683 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 GABRB2P47870 512 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 IDH3AP50213 366 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 HEATR6Q6AI08 1181 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 ADGRG6Q86SQ4 1221 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 CDKL3Q8IVW4 592 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 LPAR1Q92633 364 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 MRPL1Q9BYD6 325 aaKnown RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 SDCBP2Q9H190 292 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 COPS7BQ9H9Q2 264 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-201ENST00000309017 PNPLA8Q9NP80 782 aa11.49□□□□□ -0.57
PTPN7-201ENST00000309017 MYOCOSA0A1B0GUC4 107 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 OGTO15294 1046 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 MAFGO15525 162 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 MICAL2O94851 1124 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 ASLP04424 464 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 ITGAXP20702 1163 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 XIAPP98170 497 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PTPN11Q06124 597 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PPM1JQ5JR12 505 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PQLC1Q8N2U9 271 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 ACTRT2Q8TDY3 377 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 USP13Q92995 863 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 NLRP4Q96MN2 994 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 ARHGAP10A1A4S6 786 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 EDN1P05305 212 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PRKCBP05771 671 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 SDC4P31431 198 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 GMPRP36959 345 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 PKNOX1P55347 436 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 CAPSQ13938 189 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 HNRNPDQ14103 355 aaKnown RBP11.48□□□□□ -0.57
PTPN7-201ENST00000309017 SURF1Q15526 300 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 CES3Q6UWW8 571 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 RNF111Q6ZNA4 994 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 TNS4Q8IZW8 715 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 ITFG2Q969R8 447 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
PTPN7-201ENST00000309017 NRBP2Q9NSY0 501 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms