RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 IFT20Q8IY31 132 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 SPATA4Q8NEY3 305 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ALG3Q92685 438 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 RRP36Q96EU6 259 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 NOX5Q96PH1 765 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 OSBPL9Q96SU4 736 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 SSBP3Q9BWW4 388 aaPredicted RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 PHF7Q9BWX1 381 aaPredicted RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GLT8D2Q9H1C3 349 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 PCED1AQ9H1Q7 454 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CWH43Q9H720 699 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 JADE2Q9NQC1 790 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 AGPAT5Q9NUQ2 364 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GOLGA6AQ9NYA3 693 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 UBP1Q9NZI7 540 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CEP72Q9P209 647 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ARHGAP20Q9P2F6 1191 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GGT7Q9UJ14 662 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 NOC2LQ9Y3T9 749 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 RWDD3Q9Y3V2 267 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CNOT1A5YKK6 2376 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ZZEF1O43149 2961 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 NOTCH4Q99466 2003 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 TDRD15B5MCY1 1934 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 MIA3Q5JRA6 1907 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 KDM3AQ9Y4C1 1321 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 SMCO2A6NFE2 343 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 C9IYK1 514 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 H0Y858 1186 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 EBAG9O00559 213 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ZNF263O14978 683 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 EIF3HO15372 352 aaKnown RBP eCLIP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 AKR1B10O60218 316 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 CCNE2O96020 404 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SERPING1P05155 500 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 IBSPP21815 317 aaPredicted RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 GARTP22102 1010 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SP100P23497 879 aaPredicted RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 PBX3P40426 434 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 USP8P40818 1118 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 NOP2P46087 812 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 NAPAP54920 295 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 FKBP3Q00688 224 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SIGLEC14Q08ET2 396 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 PAK2Q13177 524 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM119Q4V9L6 283 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 CCDC181Q5TID7 509 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 HAUS3Q68CZ6 603 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 PPP4R3AQ6IN85 833 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 LRIG3Q6UXM1 1119 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM184AQ6ZMB5 413 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 USP51Q70EK9 711 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SND1Q7KZF4 910 aaKnown RBP eCLIP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 HEATR3Q7Z4Q2 680 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 YTHDF3Q7Z739 585 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TEX2Q8IWB9 1127 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ZC3H3Q8IXZ2 948 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 C10orf67Q8IYJ2 551 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 KIAA0319LQ8IZA0 1049 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 REXO1Q8N1G1 1221 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ARFGAP2Q8N6H7 521 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM105Q8N8V8 129 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 COLGALT1Q8NBJ5 622 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 KIAA0895Q8NCT3 520 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 C3orf20Q8ND61 904 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SEPT1Q8WYJ6 367 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 LARP4BQ92615 738 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 RAD54LQ92698 747 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 GPRASP2Q96D09 838 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 MTMR9Q96QG7 549 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 RUFY1Q96T51 708 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 MMTAG2Q9BU76 263 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TRAIPQ9BWF2 469 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 APOL5Q9BWW9 433 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TLR10Q9BXR5 811 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 CAPS2Q9BXY5 557 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 CELF4Q9BZC1 486 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 NT5C3AQ9H0P0 336 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 DEF6Q9H4E7 631 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TLE6Q9H808 572 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 YY1AP1Q9H869 796 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 RXFP1Q9HBX9 757 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ERVK-5Q9HDB9 667 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 GDF3Q9NR23 364 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TLR9Q9NR96 1032 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TYW1Q9NV66 732 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 ERAP1Q9NZ08 941 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 AIPL1Q9NZN9 384 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 NTMQ9P121 344 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TRIM10Q9UDY6 481 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 LRWD1Q9UFC0 647 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 SEC63Q9UGP8 760 aaKnown RBP5.22□□□□□ -1.57
CKS1B-201ENST00000308987 RSPH14Q9UHP6 348 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 LCMT1Q9UIC8 334 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TSC22D4Q9Y3Q8 395 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 DAAM1Q9Y4D1 1078 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 PCDHA2Q9Y5H9 948 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 TRPV2Q9Y5S1 764 aa5.22□□□□□ -1.57
CKS1B-201ENST00000308987 BZW2Q9Y6E2 419 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms