RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CCDC70Q6NSX1 233 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC137Q6PK04 289 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DENND5BQ6ZUT9 1274 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 BBS12Q6ZW61 710 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 BEND5Q7L4P6 421 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 SPRED2Q7Z698 418 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 GSPT2Q8IYD1 628 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 KLHL23Q8NBE8 558 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DQX1Q8TE96 717 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 GIPC2Q8TF65 315 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 MAIP1Q8WWC4 291 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 HAUS1Q96CS2 278 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 SPATA17Q96L03 361 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 RAD9AQ99638 391 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 CALN1Q9BXU9 219 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 ZBP1Q9H171 429 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 GDF3Q9NR23 364 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 GMIPQ9P107 970 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 AFF4Q9UHB7 1163 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 EFR3BQ9Y2G0 817 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 MAP1BP46821 2468 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 CARNS1A5YM72 827 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TLL1O43897 1013 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CST8O60676 142 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TJP3O95049 919 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FNTAP49354 379 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DYNLT1P63172 113 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DR1Q01658 176 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 EIF4EBP2Q13542 120 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DHX34Q14147 1143 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 KRT81Q14533 505 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PDK2Q15119 407 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 C9orf50Q5SZB4 431 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 BTBD8Q5XKL5 378 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 JAMLQ86YT9 394 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RFX6Q8HWS3 928 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PQLC3Q8N755 202 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC26Q8TAB7 109 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ZNF461Q8TAF7 563 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PHOSPHO2Q8TCD6 241 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CASKIN2Q8WXE0 1202 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RUBCNQ92622 972 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CASP10Q92851 521 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FAF2Q96CS3 445 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FBXO44Q9H4M3 255 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DHX35Q9H5Z1 703 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 EPB41L5Q9HCM4 733 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 AAASQ9NRG9 546 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ABCC13Q9NSE7 274 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DDIT4Q9NX09 232 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RRN3Q9NYV6 651 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SAE1Q9UBE0 346 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 NUDT5Q9UKK9 219 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 USP24Q9UPU5 2620 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 GCN1Q92616 2671 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC151A5D8V7 595 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SLC38A8A6NNN8 435 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TEX28O15482 410 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 IRAK2O43187 625 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 MSI1O43347 362 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 LIASO43766 372 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RTN3O95197 1032 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CTSAP10619 480 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ATF2P15336 505 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PECAM1P16284 738 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 YWHAQP27348 245 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TNFRSF8P28908 595 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CARSP49589 748 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CXCR3P49682 368 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RPL10AP62906 217 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TAF10Q12962 218 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RAB33AQ14088 237 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 BRD3Q15059 726 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CCNG2Q16589 344 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ANKRD20A8PQ5CZ79 823 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PPP6R3Q5H9R7 873 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 NPNTQ6UXI9 565 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CCNI2Q6ZMN8 369 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 MAATS1Q7Z4T9 603 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 MON1AQ86VX9 555 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 VSIG1Q86XK7 387 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DDX42Q86XP3 938 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC105Q8IYK2 499 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PLD5Q8N7P1 536 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 PCDH19Q8TAB3 1148 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SEC14L1Q92503 715 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SLCO2A1Q92959 643 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FBXO32Q969P5 355 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 RNF157Q96PX1 679 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ZNF670Q9BS34 389 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 TTYH1Q9H313 450 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SMOC2Q9H3U7 446 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FAM204AQ9H8W3 233 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 MRPL17Q9NRX2 175 aaKnown RBP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTCD2-201ENST00000308077 FNIP2Q9P278 1114 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 SFMBT1Q9UHJ3 866 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 DNPEPQ9ULA0 475 aa7.23□□□□□ -1.25
PTCD2-201ENST00000308077 ANKRD17O75179 2603 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms