RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CAPN9O14815 690 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 OR4Q2P0C623 313 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 CYP2C18P33260 490 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 SLC11A1P49279 550 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 GYS2P54840 703 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 CCL23P55773 120 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 NFE2Q16621 373 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 C1orf228Q6PIY5 440 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 UNC45BQ8IWX7 931 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 SLC7A14Q8TBB6 771 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 RTP4Q96DX8 246 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 MAGEB5Q9BZ81 275 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 CDC42EP4Q9H3Q1 356 aaKnown RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 C10orf88Q9H8K7 445 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 CWC15Q9P013 229 aaKnown RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 ADAM21Q9UKJ8 722 aa12.33□□□□□ -0.44
TRIM40-205ENST00000307859 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-205ENST00000307859 DOCK4Q8N1I0 1966 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 CFAP69A5D8W1 941 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 OR6C75A6NL08 312 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 HMGB1P1B2RPK0 211 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 F9P00740 461 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 IFNB1P01574 187 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 ALDH2P05091 517 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 MYZAPP0CAP1 466 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 NCAM1P13591 858 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 RPL22P35268 128 aaKnown RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 ARL4AP40617 200 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 MAGEA11P43364 429 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 NR2C2P49116 596 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 SLC5A3P53794 718 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 ELAVL2Q12926 359 aaKnown RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 NME3Q13232 169 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 XRCC4Q13426 336 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 UBAP2Q5T6F2 1119 aaKnown RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 FAM171A1Q5VUB5 890 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 NCBP2-AS2Q69YL0 99 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 CCDC25Q86WR0 208 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 PRCCQ92733 491 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-205ENST00000307859 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 ATP6V1G3Q96LB4 118 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM109Q9BVC6 243 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 PHACTR1Q9C0D0 580 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 USP29Q9HBJ7 922 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
TRIM40-205ENST00000307859 BCLAF3A2AJT9 711 aaKnown RBP12.31□□□□□ -0.44
TRIM40-205ENST00000307859 GOLGA6L10A6NI86 522 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 H3BRJ5 948 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 H7C0C1 242 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 SHBGP04278 402 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 GALTP07902 379 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 GOT1P17174 413 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ADRA1BP35368 520 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 GRIK1P39086 918 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ATP5OP48047 213 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 CXCR3P49682 368 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 CTXN3Q4LDR2 81 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ZNF280DQ6N043 979 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 FUT10Q6P4F1 479 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 DARS2Q6PI48 645 aaKnown RBP12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ZC3H18Q86VM9 953 aaKnown RBP12.31□□□□□ -0.44
TRIM40-205ENST00000307859 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 FAM71DQ8N9W8 422 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 RNF139Q8WU17 664 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 BADQ92934 168 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 LRFN3Q9BTN0 628 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ARHGEF4Q9NR80 690 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 DDIT4Q9NX09 232 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 ABI2Q9NYB9 513 aaPredicted RBP12.31□□□□□ -0.44
TRIM40-205ENST00000307859 PSD3Q9NYI0 1048 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 FBXW11Q9UKB1 542 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 HEY1Q9Y5J3 304 aa12.31□□□□□ -0.44
TRIM40-205ENST00000307859 SYNJ2BP-COX16A0A087WUM0 186 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 SMAPO00193 183 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 TRIM66O15016 1216 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 TTC4O95801 387 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 EFEMP2O95967 443 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 AMPD1P23109 780 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 583.8 ms