RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TTC26A0AVF1 554 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 TRIM49BA6NDI0 452 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 KCNN4O15554 427 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ADH1CP00326 375 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 GPC1P35052 558 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 PRKAA1Q13131 559 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ZRANB3Q5FWF4 1079 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 DPP10Q8N608 796 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 C17orf80Q9BSJ5 609 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC28A3Q9HAS3 691 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 INTS13Q9NVM9 706 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 A0A1W2PQ67 120 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SNHG28P0DPA3 235 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 COL6A1P12109 1028 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MYL6P60660 151 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 TMEM119Q4V9L6 283 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MRNIPQ6NTE8 343 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 RFWD2Q8NHY2 731 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 RIPOR3Q96MK2 946 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MCEEQ96PE7 176 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ADI1Q9BV57 179 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 KCNMB3Q9NPA1 279 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SPTLC3Q9NUV7 552 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 WNK3Q9BYP7 1800 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 A0A0A6YYK5 440 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 H7C0S8 307 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SOAT2O75908 522 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 RRM2P31350 389 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 HTR7P34969 479 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 DNAJC1Q96KC8 554 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 OSBPL9Q96SU4 736 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 VAT1Q99536 393 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 IMPAD1Q9NX62 359 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF541Q9H0D2 1346 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 QSOX1O00391 747 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ATP5C1P36542 298 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MAPK9P45984 424 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ALDH6A1Q02252 535 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 STK4Q13043 487 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 DGKZQ13574 1117 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 NR1I3Q14994 352 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 CCDC137Q6PK04 289 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MAGEC3Q8TD91 643 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 FAR2Q96K12 515 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 CAPN10Q9HC96 672 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SRRDQ9UH36 339 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 IFRD1O00458 451 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP3A5P20815 502 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 STAT4Q14765 748 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 HIBCHQ6NVY1 386 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 IFNLR1Q8IU57 520 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MAP4K3Q8IVH8 894 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 P3H2Q8IVL5 708 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TUBGCP3Q96CW5 907 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 DYRK1BQ9Y463 629 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 A0A1B0GUL6 1792 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PEX1O43933 1283 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 RECQL4O94761 1208 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PSMC3P17980 439 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 AIF1P55008 147 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ALFQ53S48 1182 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 C16orf89Q6UX73 402 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 KIAA2013Q8IYS2 634 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TSC22D3Q99576 134 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 RUSC1Q9BVN2 902 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 GTF2A1LQ9UNN4 478 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 SYN3O14994 580 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF268Q14587 947 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CACHD1Q5VU97 1274 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TTC23Q5W5X9 447 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 E2F7Q96AV8 911 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CENPTQ96BT3 561 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MAGEB10Q96LZ2 347 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CISHQ9NSE2 258 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 BRWD3Q6RI45 1802 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 NUP205Q92621 2012 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MED24O75448 989 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 FGBP02675 491 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 GLI1P08151 1106 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ITIH2P19823 946 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 GEMP55040 296 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 POU4F1Q01851 419 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CUL3Q13618 768 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 DDI1Q8WTU0 396 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CNBD2Q96M20 576 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 APOL5Q9BWW9 433 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 ARHGEF3Q9NR81 526 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 WWOXQ9NZC7 414 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 F5H423 210 aaPredicted RBP8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 MYL2P10916 166 aa8.56□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP2A6P11509 494 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms