RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MTHFD1LQ6UB35 978 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 ZNF333Q96JL9 665 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 CEP350Q5VT06 3117 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 SYNJ2BP-COX16A0A087WUM0 186 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 A6NJR5 290 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 NVLO15381 856 aaKnown RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 PDHA1P08559 390 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 GMPRP36959 345 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 IREB2P48200 963 aaKnown RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 IRX1P78414 480 aaPredicted RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 RCN1Q15293 331 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 MUM1Q2TAK8 710 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 ERO1BQ86YB8 467 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 APLFQ8IW19 511 aaPredicted RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 LGMNQ99538 433 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 EBNA1BP2Q99848 306 aaKnown RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 EIF2AQ9BY44 585 aaKnown RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 FAM49AQ9H0Q0 323 aaPredicted RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 NMRK1Q9NWW6 199 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 MTMR10Q9NXD2 777 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 COX16Q9P0S2 106 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 GJD2Q9UKL4 321 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 KIAA1257Q9ULG3 409 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 AP4E1Q9UPM8 1137 aa15.64■□□□□ 0.09
CSDC2-201ENST00000306149 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.64■□□□□ 0.09
CSDC2-201ENST00000306149 WDR27A2RRH5 827 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 A8MXQ7 604 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 GOT1P17174 413 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 LMO2P25791 158 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 AQP5P55064 265 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 KDSRQ06136 332 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 ZNF618Q5T7W0 954 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 LGSNQ5TDP6 509 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 DEPDC1BQ8WUY9 529 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 TEKT4Q8WW24 435 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 KCTD15Q96SI1 283 aaPredicted RBP15.63■□□□□ 0.09
CSDC2-201ENST00000306149 ZNF670Q9BS34 389 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 SLC24A3Q9HC58 644 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 ARHGEF4Q9NR80 690 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 B2RBV5 119 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 H3BRJ5 948 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 DPYSL4O14531 572 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 TRDMT1O14717 391 aaKnown RBP15.63■□□□□ 0.09
CSDC2-201ENST00000306149 YY1P25490 414 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
CSDC2-201ENST00000306149 CCDC6Q16204 474 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 TAPT1Q6NXT6 567 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 FAM131BQ86XD5 332 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 GSDMBQ8TAX9 411 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 FRMD8Q9BZ67 464 aaPredicted RBP15.63■□□□□ 0.09
CSDC2-201ENST00000306149 CDHR5Q9HBB8 845 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.63■□□□□ 0.09
CSDC2-201ENST00000306149 ZNF180Q9UJW8 692 aa15.63■□□□□ 0.09
CSDC2-201ENST00000306149 ZSWIM8A7E2V4 1837 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 E2F8A0AVK6 867 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 H3BRB1 525 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 MDM4O15151 490 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 KRT38O76015 456 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 AKAP5P24588 427 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 ALDH18A1P54886 795 aaKnown RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 SESN2P58004 480 aaPredicted RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 LBRQ14739 615 aaKnown RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 MAMDC4Q6UXC1 1216 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 SESTD1Q86VW0 696 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 CDKL3Q8IVW4 592 aaPredicted RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 CSPG4P5Q96PW8 444 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 TBCBQ99426 244 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 EBF4Q9BQW3 602 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 C16orf70Q9BSU1 422 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 TUT1Q9H6E5 874 aaKnown RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 DTLQ9NZJ0 730 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 OTOFQ9HC10 1997 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 F7P08709 466 aaPredicted RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 RARBP10826 455 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 OCRLQ01968 901 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 POU5F1BQ06416 359 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 KLC1Q07866 573 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 LAMC2Q13753 1193 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 PDCD7Q8N8D1 485 aaKnown RBP15.62■□□□□ 0.09
CSDC2-201ENST00000306149 APBB2Q92870 758 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 FAM136AQ96C01 138 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 OPTNQ96CV9 577 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 CLPTM1LQ96KA5 538 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 MKS1Q9NXB0 559 aa15.62■□□□□ 0.09
CSDC2-201ENST00000306149 FAM159BA6NKW6 160 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 LYPLA1O75608 230 aaPredicted RBP15.61■□□□□ 0.09
CSDC2-201ENST00000306149 PSMG1O95456 288 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 VAV1P15498 845 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 PITX1P78337 314 aaPredicted RBP15.61■□□□□ 0.09
CSDC2-201ENST00000306149 NBPF20Q3BBV1 942 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 MARCH8Q5T0T0 291 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 HEATR6Q6AI08 1181 aaKnown RBP15.61■□□□□ 0.09
CSDC2-201ENST00000306149 CES3Q6UWW8 571 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 TRIM42Q8IWZ5 723 aa15.61■□□□□ 0.09
CSDC2-201ENST00000306149 STKLD1Q8NE28 680 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms