RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CCZ1P86791 482 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 AARS2Q5JTZ9 985 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 TSPAN17Q96FV3 270 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GPR88Q9GZN0 384 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GMIPQ9P107 970 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SEPT3Q9UH03 358 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 TFR2Q9UP52 801 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NR2E1Q9Y466 385 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ASB3Q9Y575 518 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GOLGA8QA0A0J9YX86 632 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GOLGA8OA6NCC3 632 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SIGLEC16A6NMB1 481 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NEDD8-MDP1E9PL57 170 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GOLGA8NF8WBI6 632 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 TRDMT1O14717 391 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 CILPO75339 1184 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 EN2P19622 333 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ITIH2P19823 946 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 CHRM3P20309 590 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 AMPD1P23109 780 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 KCNJ1P48048 391 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NOVP48745 357 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 RBBP5Q15291 538 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 TMTC4Q5T4D3 741 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 FAXCQ5TGI0 409 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 LPCAT1Q8NF37 534 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 PCYT2Q99447 389 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 XAB2Q9HCS7 855 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 KLHL14Q9P2G3 628 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 A0A1W2PQH9 124 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 PMS2P54278 862 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 MAPK8IP2Q13387 824 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 PTK6Q13882 451 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NAT16Q8N8M0 369 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF669Q96BR6 464 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 WDR24Q96S15 920 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 RBM15Q96T37 977 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 BRD8Q9H0E9 1235 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NEU2Q9Y3R4 380 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 DDX3XO00571 662 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF185O15231 689 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 NVLO15381 856 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SERPINA4P29622 427 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 PPP3CCP48454 512 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SLC11A1P49279 550 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SNRPD1P62314 119 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 TMPRSS15P98073 1019 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 C15orf59Q2T9L4 293 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 MMEL1Q495T6 779 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ACBD5Q5T8D3 534 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 MRNIPQ6NTE8 343 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 RD3Q7Z3Z2 195 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 DNAAF5Q86Y56 855 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 CCNYL1Q8N7R7 359 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ZYG11BQ9C0D3 744 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ZDHHC6Q9H6R6 413 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 FBXO10Q9UK96 956 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 GNEQ9Y223 722 aaKnown RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SMIM24O75264 130 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 GJB6O95452 261 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 TGM2P21980 687 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 IMPG1Q17R60 797 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 DAW1Q8N136 415 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MCUR1Q96AQ8 359 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 PCED1BQ96HM7 432 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 FUBP3Q96I24 572 aaKnown RBP eCLIP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 VPS50Q96JG6 964 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CYTH2Q99418 400 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 FRMD8Q9BZ67 464 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 RABEP2Q9H5N1 569 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 SFMBT1Q9UHJ3 866 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 ANKRD36CQ5JPF3 1778 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CCDC151A5D8V7 595 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 RASA4BC9J798 803 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 RASA4O43374 803 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 HSPA4LO95757 839 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CYP2A6P11509 494 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 THOP1P52888 689 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MARSP56192 900 aaKnown RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 TTLL9Q3SXZ7 439 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 E4F1Q66K89 784 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 LCLAT1Q6UWP7 414 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 OTOP3Q7RTS5 596 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 TIFAQ96CG3 184 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CABS1Q96KC9 395 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 OSGEPL1Q9H4B0 414 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 CDHR5Q9HBB8 845 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 SIK3Q9Y2K2 1263 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 WDR91A4D1P6 747 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 TMCC1O94876 653 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 GLI1P08151 1106 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 GFAPP14136 432 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 MATKP42679 507 aa9.53□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF143P52747 638 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-202ENST00000306042 LEMD2Q8NC56 503 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms