RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ARHGAP8P85298 464 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 OASLQ15646 514 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 SNX32Q86XE0 403 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 CDC26Q8NHZ8 85 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 CNDP1Q96KN2 507 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 RNF157Q96PX1 679 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 NSMCE4AQ9NXX6 385 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 DPPA5A6NC42 116 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 RNF103O00237 685 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 MTSS1O43312 755 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 BCAT1P54687 386 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 TSPY1Q01534 308 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 BLMHQ13867 455 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ZC3H12AQ5D1E8 599 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 ULK2Q8IYT8 1036 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 LRRC39Q96DD0 335 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 DDX18Q9NVP1 670 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 RPL26L1Q9UNX3 145 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 UNGP13051 313 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 ACO1P21399 889 aaKnown RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 CDKN2BP42772 138 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ZNF143P52747 638 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 GSCP56915 257 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 OCA2Q04671 838 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 NET1Q7Z628 596 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 THEM5Q8N1Q8 247 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 NKD2Q969F2 451 aaPredicted RBP13.66□□□□□ -0.22
DDX54-201ENST00000306014 ZBTB18Q99592 522 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 ADNPQ9H2P0 1102 aa13.66□□□□□ -0.22
DDX54-201ENST00000306014 SYCE1LA8MT33 242 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 DYNC1LI2O43237 492 aaPredicted RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 SUPT7LO94864 414 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 GSTT1P30711 240 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 SPON2Q9BUD6 331 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 ACOT9Q9Y305 439 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 SNX5Q9Y5X3 404 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 LYPLA1O75608 230 aaPredicted RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 USP1O94782 785 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 NFICP08651 508 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 TAF6P49848 677 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 PKNOX1P55347 436 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 NME5P56597 212 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 TSTA3Q13630 321 aaPredicted RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 RNF220Q5VTB9 566 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 MFN1Q8IWA4 741 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 ZNF786Q8N393 782 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 GSTCDQ8NEC7 633 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 MAN1C1Q9NR34 630 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 RNF19AQ9NV58 838 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 STX18Q9P2W9 335 aaKnown RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 LAMA4Q16363 1823 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 LRCH4O75427 683 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 MRPS22P82650 360 aaKnown RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 PTP4A2Q12974 167 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 SPRED3Q2MJR0 410 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 ZC3H3Q8IXZ2 948 aaKnown RBP13.65□□□□□ -0.22
DDX54-201ENST00000306014 ABI1Q8IZP0 508 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
DDX54-201ENST00000306014 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 PSMD3O43242 534 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 TBC1D12O60347 775 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 STMN1P16949 149 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 UBA1P22314 1058 aaKnown RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 HSPA13P48723 471 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 ARHGEF6Q15052 776 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 DGKDQ16760 1214 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 FAM83EQ2M2I3 478 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.64□□□□□ -0.234e-8■■■■■ 52.3
DDX54-201ENST00000306014 SNRNP25Q9BV90 132 aaKnown RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 WDCPQ9H6R7 721 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 PKD2L2Q9NZM6 624 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 UBQLN1Q9UMX0 589 aaKnown RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 PGM3O95394 542 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
DDX54-201ENST00000306014 CD48P09326 243 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 INSRRP14616 1297 aa13.64□□□□□ -0.23
DDX54-201ENST00000306014 PGAM1P18669 254 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms