RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ZDHHC4Q9NPG8 344 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 STOML2Q9UJZ1 356 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 SLC27A6Q9Y2P4 619 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 GPR179Q6PRD1 2367 aa27.58■■■□□ 2.01
CDKN2A-201ENST00000304494 NCAM1P13591 858 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 NTSR1P30989 418 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 SPEM2Q0P670 501 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 NUGGCQ68CJ6 796 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 SDE2Q6IQ49 451 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 BEND5Q7L4P6 421 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 TMEM110Q86TL2 294 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 KBTBD6Q86V97 674 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 UNC45BQ8IWX7 931 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 MDGA1Q8NFP4 955 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 FAM149B1Q96BN6 582 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 TPSD1Q9BZJ3 242 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 PCDHGC3Q9UN70 934 aa27.57■■■□□ 2
CDKN2A-201ENST00000304494 ID4P47928 161 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 LMNB2Q03252 620 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 RING1Q06587 406 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 ELF2Q15723 593 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 MPPE1Q53F39 396 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 ADGRF1Q5T601 910 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 CHPFQ8IZ52 775 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 SLC2A11Q9BYW1 496 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 CYTH4Q9UIA0 394 aa27.56■■■□□ 2
CDKN2A-201ENST00000304494 PRRT4C9JH25 899 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 E5RJQ4 531 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 RHOBTB1O94844 696 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 IGLV3-27P01718 113 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 TPM2P07951 284 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 HNRNPLP14866 589 aaKnown RBP eCLIP27.55■■■□□ 2
CDKN2A-201ENST00000304494 TGM1P22735 817 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 SLC11A2P49281 568 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 PDCLQ13371 301 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 PLK5Q496M5 336 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 EGFLAMQ63HQ2 1017 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 P2RY11Q96G91 374 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 SERPINB11Q96P15 392 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 PARD6AQ9NPB6 346 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 ANO10Q9NW15 660 aa27.55■■■□□ 2
CDKN2A-201ENST00000304494 BCCIPQ9P287 314 aaKnown RBP eCLIP27.55■■■□□ 2
CDKN2A-201ENST00000304494 AJAP1Q9UKB5 411 aaPredicted RBP27.55■■■□□ 2
CDKN2A-201ENST00000304494 TCRBV21S2A2A0A5A6 115 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 FOXN3O00409 490 aaPredicted RBP27.54■■■□□ 2
CDKN2A-201ENST00000304494 CAPN9O14815 690 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 FOXD2O60548 495 aaPredicted RBP27.54■■■□□ 2
CDKN2A-201ENST00000304494 HOXB2P14652 356 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 KRT9P35527 623 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 TBX4P57082 545 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 BPIFB4P59827 614 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 NNTQ13423 1086 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 E2F5Q15329 346 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 NOX5Q96PH1 765 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 IRX2Q9BZI1 471 aaPredicted RBP27.54■■■□□ 2
CDKN2A-201ENST00000304494 LHX5Q9H2C1 402 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 POPDC2Q9HBU9 364 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 HCN2Q9UL51 889 aa27.54■■■□□ 2
CDKN2A-201ENST00000304494 PRR5-ARHGAP8B1AHC4 643 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 GFRA2O00451 464 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 PAPSS1O43252 624 aaPredicted RBP27.53■■■□□ 2
CDKN2A-201ENST00000304494 EPN2O95208 641 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 FYNP06241 537 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 SDHBP21912 280 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 GBP1P32455 592 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 ARHGAP8P85298 464 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 KCNMA1Q12791 1236 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 RAPGEF1Q13905 1077 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 CSRP2Q16527 193 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 STX1AQ16623 288 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 CDKAL1Q5VV42 579 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 ANKS1BQ7Z6G8 1248 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 FAM71AQ8IYT1 594 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 DQX1Q8TE96 717 aaKnown RBP27.53■■■□□ 2
CDKN2A-201ENST00000304494 HMGB4Q8WW32 186 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 AZIN2Q96A70 460 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 DUSP15Q9H1R2 295 aaPredicted RBP27.53■■■□□ 2
CDKN2A-201ENST00000304494 SEMA4GQ9NTN9 838 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 NAALADL1Q9UQQ1 740 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 TLR6Q9Y2C9 796 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 CEP83Q9Y592 693 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 PCDHGA5Q9Y5G8 931 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 DMXL1Q9Y485 3027 aa27.53■■■□□ 2
CDKN2A-201ENST00000304494 EML5Q05BV3 1969 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 DCLK1O15075 740 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 NPC1O15118 1278 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 ZBTB24O43167 697 aaPredicted RBP27.52■■■□□ 2
CDKN2A-201ENST00000304494 CLCN1P35523 988 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 SNX16P57768 344 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 YWHAZP63104 245 aaKnown RBP27.52■■■□□ 2
CDKN2A-201ENST00000304494 BYSLQ13895 437 aaKnown RBP27.52■■■□□ 2
CDKN2A-201ENST00000304494 CCDC183Q5T5S1 534 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 KLHDC7AQ5VTJ3 777 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 DPY19L2P1Q6NXN4 242 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 SLC47A2Q86VL8 602 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 PGBD3Q8N328 593 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 OLIG1Q8TAK6 271 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 UCMAQ8WVF2 138 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 TMA16Q96EY4 203 aaKnown RBP27.52■■■□□ 2
CDKN2A-201ENST00000304494 PIWIL1Q96J94 861 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms