RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 RBL1P28749 1068 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 NME5P56597 212 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 POU6F1Q14863 301 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 EFCAB1Q9HAE3 211 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 VPS26AO75436 327 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 LRG1P02750 347 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 CCR1P32246 355 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 PTK2BQ14289 1009 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 AARS2Q5JTZ9 985 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 KCNMB4Q86W47 210 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 UNKQ9C0B0 810 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 CXorf56Q9H5V9 222 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 RPLP2P05387 115 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 BTKQ06187 659 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 CAPSQ13938 189 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 PTAR1Q7Z6K3 402 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 TAGAPQ8N103 731 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 CPNE1Q99829 537 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 KDM4FA0A1W2PPD8 638 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 C5orf58C9J3I9 102 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 CFAP99D6REC4 459 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 TMEM132BQ14DG7 1078 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 CCDC153Q494R4 210 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 OVOS1Q6IE37 1185 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 PKN3Q6P5Z2 889 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 MREGQ8N565 214 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 SHC3Q92529 594 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 ART4Q93070 314 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 MYLK2Q9H1R3 596 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 FKBP9O95302 570 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 PSEN2P49810 448 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 CDH17Q12864 832 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 C15orf59Q2T9L4 293 aaPredicted RBP16.8■□□□□ 0.28
BRD3-201ENST00000303407 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 FKBP9P1Q75LS8 142 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 ZNF75CPQ92670 426 aaPredicted RBP16.8■□□□□ 0.28
BRD3-201ENST00000303407 RBM22Q9NW64 420 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■□□ 19
BRD3-201ENST00000303407 RRN3Q9NYV6 651 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 KCNA4P22459 653 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 GALNTL6Q49A17 601 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 ABHD16BQ9H3Z7 469 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 RBAK-RBAKDNI3L0D1 243 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 GLP2RO95838 553 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 RBP1P09455 135 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 RPA3P35244 121 aaPredicted RBP16.8■□□□□ 0.28
BRD3-201ENST00000303407 CES3Q6UWW8 571 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 OR9Q1Q8NGQ5 310 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
BRD3-201ENST00000303407 SPATA31C2B4DYI2 1134 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 CRTAMO95727 393 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 HSPA13P48723 471 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 RAB27AP51159 221 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 PCSK9Q8NBP7 692 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 OXNAD1Q96HP4 312 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 TEKT2Q9UIF3 430 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 BAZ2BQ9UIF8 2168 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 MAGEA13PA6NCF6 341 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 C16orf96A6NNT2 1141 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 SLCO1B7G3V0H7 640 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 ZNF280DQ6N043 979 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 NUDT18Q6ZVK8 323 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 USP13Q92995 863 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 TMEM237Q96Q45 408 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 TNFSF13BQ9Y275 285 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 GP5P40197 560 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 POLD3Q15054 466 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 ANKS3Q6ZW76 656 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 ADCK2Q7Z695 626 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 PRELID2Q8N945 189 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 LRRC19Q9H756 370 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 EIF3LQ9Y262 564 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 hCG_2014768A0A024R1R8 64 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 HNRNPCL2B2RXH8 293 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 ZSCAN9O15535 394 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 TRUB2O95900 331 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 RHOCP08134 193 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 ALADP13716 330 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 CDH2P19022 906 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 PHF13Q86YI8 300 aaPredicted RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 RBBP8Q99708 897 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 CCT7Q99832 543 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 DCLRE1BQ9H816 532 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 SNCAIPQ9Y6H5 919 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 PLA2G6O60733 806 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 SERPINE1P05121 402 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 PSMA4P25789 261 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 CHKAP35790 457 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 BRD8Q9H0E9 1235 aa16.79■□□□□ 0.28
BRD3-201ENST00000303407 TLR8Q9NR97 1041 aaKnown RBP16.79■□□□□ 0.28
BRD3-201ENST00000303407 XPO1O14980 1071 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms