RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CALB2P22676 271 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 PRKCEQ02156 737 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 TAF5Q15542 800 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 TKFCQ3LXA3 575 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 CCDC153Q494R4 210 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 LRRC74BQ6ZQY2 392 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 STRA8Q7Z7C7 330 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 COL23A1Q86Y22 540 aaPredicted RBP10.65□□□□□ -0.7
CLIP1-201ENST00000302528 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 DCUN1D5Q9BTE7 237 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 FICDQ9BVA6 458 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 PDGFCQ9NRA1 345 aa10.65□□□□□ -0.7
CLIP1-201ENST00000302528 NEO1Q92859 1461 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 KPNA6O60684 536 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 GUCY1B2O75343 617 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 TPBGLP0DKB5 382 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 FGFR2P21802 821 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 CASP4P49662 377 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 STARP49675 285 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 FAM220AQ7Z4H9 259 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-201ENST00000302528 TRIM9Q9C026 710 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 GSTK1Q9Y2Q3 226 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 TDRKHQ9Y2W6 561 aaKnown RBP10.65□□□□□ -0.71
CLIP1-201ENST00000302528 ACOT9Q9Y305 439 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 LYVE1Q9Y5Y7 322 aa10.65□□□□□ -0.71
CLIP1-201ENST00000302528 KATNA1O75449 491 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HIST1H2ABP04908 130 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ITGB3P05106 788 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HNRNPH1P31943 449 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 NUMBP49757 651 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HK2P52789 917 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ABATP80404 500 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 EPC2Q52LR7 807 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PACS1Q6VY07 963 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 BRINP3Q76B58 766 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HIST3H2AQ7L7L0 130 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 SLC22A9Q8IVM8 553 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 USP38Q8NB14 1042 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PROX1Q92786 737 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HIST1H2ACQ93077 130 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 KCND2Q9NZV8 630 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 FKBP6O75344 327 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CCDC166P0CW27 439 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 SKIV2L2P42285 1042 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 IRAK1P51617 712 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF157P51786 506 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 AMPD2Q01433 879 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 SGCGQ13326 291 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 KCTD21Q4G0X4 260 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 TRPV3Q8NET8 790 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MAGEB18Q96M61 343 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PI4K2AQ9BTU6 479 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CFAP74Q9C0B2 1584 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MINPP1Q9UNW1 487 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 IQGAP1P46940 1657 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CLOCKO15516 846 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 SSNA1O43805 119 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 WEE1P30291 646 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 COPZ1P61923 177 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 EZH2Q15910 746 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CLEC4GQ6UXB4 293 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 NT5DC3Q86UY8 548 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ATP8B4Q8TF62 1192 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 EHD3Q9NZN3 535 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 F8VZ95 297 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 AKR1D1P51857 326 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 NRG3P56975 720 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 C21orf59P57076 290 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 AMHR2Q16671 573 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 SHC4Q6S5L8 630 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MCOLN3Q8TDD5 553 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 FAM172AQ8WUF8 416 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 DCLRE1BQ9H816 532 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 EPB41L4AQ9HCS5 686 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ATAD3AQ9NVI7 634 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 LIMD1Q9UGP4 676 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PTGES3LE9PB15 166 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MT-CO1P00395 513 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 TGFBR2P37173 567 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 EIF2S3P41091 472 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 GPR15P49685 360 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CBWD3Q5JTY5 395 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 CBWD5Q5RIA9 395 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 AGMOQ6ZNB7 445 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 TMEM159Q96B96 161 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MPP4Q96JB8 637 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 ZNF512BQ96KM6 892 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 MTA3Q9BTC8 594 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PTPRHQ9HD43 1115 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 UBQLN1Q9UMX0 589 aaKnown RBP10.64□□□□□ -0.71
CLIP1-201ENST00000302528 BTBD3Q9Y2F9 522 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 PPP2R3BQ9Y5P8 575 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 HEG1Q9ULI3 1381 aa10.64□□□□□ -0.71
CLIP1-201ENST00000302528 KPNA5O15131 536 aa10.63□□□□□ -0.71
CLIP1-201ENST00000302528 SPTLC1O15269 473 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms