RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 TMUB1Q9BVT8 246 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 TRPC7Q9HCX4 862 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 VTA1Q9NP79 307 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ADD3Q9UEY8 706 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 FAM169AQ9Y6X4 670 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 TNKSO95271 1327 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 HTTP42858 3142 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ANKRD34BA5PLL1 514 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 LINC01387J3KSC0 135 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DLL1O00548 723 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SOX1O00570 391 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DPYSL4O14531 572 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 IFIT3O14879 490 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 NPC1O15118 1278 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DYNC1LI2O43237 492 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 LILRB5O75023 590 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SLC22A3O75751 556 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 CRYZL1O95825 349 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 NDUFB10O96000 172 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 PLGP00747 810 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 TIMP1P01033 207 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 PRLP01236 227 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 IFNA14P01570 189 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ACAA1P09110 424 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 BMP3P12645 472 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ANXA8P13928 327 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 HOXA11P31270 313 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 PTPN9P43378 593 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 GDI2P50395 445 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 CDK7P50613 346 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ALDH5A1P51649 535 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 COPB1P53618 953 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 PMS1P54277 932 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DCAF7P61962 342 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 FPGSQ05932 587 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 HNRNPDQ14103 355 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SEPT6Q14141 434 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 HABP2Q14520 560 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 LASP1Q14847 261 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SLC39A14Q15043 492 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 RAB30Q15771 203 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ZYXQ15942 572 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 UGP2Q16851 508 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ANXA8L1Q5VT79 327 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SPECC1LQ69YQ0 1117 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 GPR139Q6DWJ6 353 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 NCAPH2Q6IBW4 605 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 JMJD6Q6NYC1 403 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ZCCHC12Q6PEW1 402 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 C3orf62Q6ZUJ4 267 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 EPM2AIP1Q7L775 607 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 GPR155Q7Z3F1 870 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 USP37Q86T82 979 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ZBTB46Q86UZ6 589 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 AFAP1L2Q8N4X5 818 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 TMEM199Q8N511 208 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 AVL9Q8NBF6 648 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 CAGE1Q8TC20 777 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 CLP1Q92989 425 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 NT5C1BQ96P26 610 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 PACSIN1Q9BY11 444 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 WDR12Q9GZL7 423 aaKnown RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 MIS12Q9H081 205 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 MYLK2Q9H1R3 596 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 SMOC1Q9H4F8 434 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DMAP1Q9NPF5 467 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ZSWIM5Q9P217 1185 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 REV1Q9UBZ9 1251 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ZNF215Q9UL58 517 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 CACNG2Q9Y698 323 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 DNMT3AQ9Y6K1 912 aaPredicted RBP4.8□□□□□ -1.64
ZNF560-201ENST00000301480 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 RLFQ13129 1914 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 ALPK3Q96L96 1907 aa4.8□□□□□ -1.64
ZNF560-201ENST00000301480 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 HEATR9A2RTY3 570 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 PMS2P1A4D2B8 440 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 ZSCAN5BA6NJL1 495 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 H3BQV1 296 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 ARVCFO00192 962 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 GPAA1O43292 621 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 SPOPO43791 374 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 PEX1O43933 1283 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
ZNF560-201ENST00000301480 GJB3O75712 270 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 F13A1P00488 732 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 OPN1MWP04001 364 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 POU2F2P09086 479 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 SUPT20HL2P0C7V6 817 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 OPN1MW2P0DN77 364 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 OPN1MW3P0DN78 364 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 COL6A2P12110 1019 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 RAG1P15918 1043 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 PTBP1P26599 531 aaKnown RBP eCLIP4.79□□□□□ -1.64
ZNF560-201ENST00000301480 SLC8A1P32418 973 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 ADCYAP1R1P41586 468 aa4.79□□□□□ -1.64
ZNF560-201ENST00000301480 ALDH1A3P47895 512 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms