RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LRCH4O75427 683 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 SEC24DO94855 1032 aaPredicted RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 VNN1O95497 513 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 OSBPP22059 807 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 GRIA1P42261 906 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 RXRGP48443 463 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 SLC5A3P53794 718 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PRKG1Q13976 671 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PIGHQ14442 188 aaPredicted RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 TRIM72Q6ZMU5 477 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 HACE1Q8IYU2 909 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 MYO1HQ8N1T3 1032 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 OR5B17Q8NGF7 314 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 DDI1Q8WTU0 396 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 C17orf50Q8WW18 174 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TCHPQ9BT92 498 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 SSX2IPQ9Y2D8 614 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 CROCCQ5TZA2 2017 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 NFASCO94856 1347 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 HMX2A2RU54 273 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PMM2O15305 246 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 AP1G1O43747 822 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 FBXO21O94952 628 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PIM1P11309 404 aaPredicted RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 MTTPP55157 894 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 CDH6P55285 790 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 MS4A2Q01362 244 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 HADHQ16836 314 aaKnown RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 RAB6CQ53S08 254 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 NXNQ6DKJ4 435 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 BBS12Q6ZW61 710 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 MAP4K3Q8IVH8 894 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 AHI1Q8N157 1196 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 ARFGAP1Q8N6T3 406 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 RAB6CQ9H0N0 254 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 CASQ2O14958 399 aaPredicted RBP11.32□□□□□ -0.6
SNX20-201ENST00000300590 ARRB2P32121 409 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 KLF10Q13118 480 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 PPP2R5DQ14738 602 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 ZACNQ401N2 412 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 SCYL2Q6P3W7 929 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 UNC5AQ6ZN44 842 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 EHMT1Q9H9B1 1298 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 FAIMQ9NVQ4 179 aa11.32□□□□□ -0.6
SNX20-201ENST00000300590 NHSQ6T4R5 1651 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 LAMB2P55268 1798 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 IL1BP01584 269 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 APOEP02649 317 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 CALB1P05937 261 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 ADORA2AP29274 412 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 EPHA3P29320 983 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 ETFBP38117 255 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 ADGRE1Q14246 886 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 SLC9B1Q4ZJI4 515 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 CCDC80Q76M96 950 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 COG4Q9H9E3 785 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 C6orf203Q9P0P8 240 aaPredicted RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 RAB26Q9ULW5 256 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 ARHGEF37A1IGU5 675 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 GRAP2O75791 330 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 FGF3P11487 239 aaPredicted RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 RBL1P28749 1068 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 ABCG1P45844 678 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
SNX20-201ENST00000300590 OGFOD2Q6N063 350 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 XKR5Q6UX68 686 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 TMEM79Q9BSE2 394 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 ZNF541Q9H0D2 1346 aa11.31□□□□□ -0.6
SNX20-201ENST00000300590 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 TPP1O14773 563 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 HSPA4LO95757 839 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CST3P01034 146 aaPredicted RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
SNX20-201ENST00000300590 CRHR1P34998 444 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CRKP46108 304 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 CD97P48960 835 aa11.3□□□□□ -0.6
SNX20-201ENST00000300590 NDST2P52849 883 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms