RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 HBS1LQ9Y450 684 aaKnown RBP8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 SDR42E2A6NKP2 422 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 SMIM24O75264 130 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 IGSF6O95976 241 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 HDCP19113 662 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 HADHAP40939 763 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 MAGEA4P43358 317 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 CLCNKBP51801 687 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 RAD23BP54727 409 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 TRADDQ15628 312 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 TTLL9Q3SXZ7 439 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 IPMKQ8NFU5 416 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 ACTL9Q8TC94 416 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 ACSF2Q96CM8 615 aaPredicted RBP8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 LRRC39Q96DD0 335 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 ZFP42Q96MM3 310 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 ARHGEF38Q9NXL2 777 aa8.57□□□□□ -1.04
SNRPD1-201ENST00000300413 KDELR1P24390 212 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TYK2P29597 1187 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 OR1E1P30953 314 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ITGA8P53708 1063 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 XRCC4Q13426 336 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 FBXO38Q6PIJ6 1188 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 WDR75Q8IWA0 830 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TBC1D19Q8N5T2 526 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 USP33Q8TEY7 942 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 PTPRN2Q92932 1015 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 MCUR1Q96AQ8 359 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ZYG11BQ9C0D3 744 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 MTA2O94776 668 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 APOA4P06727 396 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 NPY2RP49146 381 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 LGI2Q8N0V4 545 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TOX2Q96NM4 488 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 UBE2OQ9C0C9 1292 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TLE6Q9H808 572 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ATP13A1Q9HD20 1204 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ERVK-5Q9HDB9 667 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 FNDC3AQ9Y2H6 1198 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ZNF263O14978 683 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 SYNCRIPO60506 623 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 POLR2LP62875 67 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 SULT2A1Q06520 285 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 NAB1Q13506 487 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 LPIN1Q14693 890 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 KCNT1Q5JUK3 1230 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 SPDYCQ5MJ68 293 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 AGBL2Q5U5Z8 902 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 PALB2Q86YC2 1186 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CRLF3Q8IUI8 442 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 HTR3CQ8WXA8 447 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 MTBPQ96DY7 904 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 PAWRQ96IZ0 340 aaKnown RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 AGAP3Q96P47 875 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIM51Q9BSJ1 452 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 PNPLA8Q9NP80 782 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CDY1Q9Y6F8 540 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TMEM191CA6NGB0 347 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ATP4AP20648 1035 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 DDX6P26196 483 aaKnown RBP eCLIP8.56□□□□□ -1.044e-13■□□□□ 10
SNRPD1-201ENST00000300413 SLCO1A2P46721 670 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TRIM60Q495X7 471 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 RPAINQ86UA6 219 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 SLC4A11Q8NBS3 891 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CCDC197Q8NCU1 140 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 STMN2Q93045 179 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 CEP295NLQ96MC4 621 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TTYH3Q9C0H2 523 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 ADAMTS10Q9H324 1103 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 UBA2Q9UBT2 640 aaPredicted RBP8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 TBK1Q9UHD2 729 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 LRRC37AA6NMS7 1700 aa8.56□□□□□ -1.04
SNRPD1-201ENST00000300413 GRIN2DO15399 1336 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 ADGRA3Q8IWK6 1321 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 EPHB6O15197 1021 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 MNAT1P51948 309 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 GRM3Q14832 879 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 CCDC38Q502W7 563 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 BBS12Q6ZW61 710 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 CMTR2Q8IYT2 770 aaKnown RBP8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 BTN2A3PQ96KV6 586 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 TLR10Q9BXR5 811 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 PDLIM7Q9NR12 457 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 DNAJC17Q9NVM6 304 aaKnown RBP8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 OR12D3Q9UGF7 316 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 TIMM44O43615 452 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 TLR5O60602 858 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 ATP2C2O75185 946 aa8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 SEC31AO94979 1220 aaKnown RBP8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 SNRPAP09012 282 aaKnown RBP8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
SNRPD1-201ENST00000300413 CDH17Q12864 832 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms