RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GPR15P49685 360 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 ITGA8P53708 1063 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.21e-7■■□□□ 13.6
HERPUD1-201ENST00000300302 SLMAPQ14BN4 828 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 P3H1Q32P28 736 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 NPNTQ6UXI9 565 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 BZW1Q7L1Q6 419 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 TMCO2Q7Z6W1 182 aaPredicted RBP16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 PYROXD2Q8N2H3 581 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 RNF34Q969K3 372 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 IL37Q9NZH6 218 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 SLC27A5Q9Y2P5 690 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 CREB3O43889 395 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 IGLV3-25P01717 112 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 YWHAQP27348 245 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 GPS1Q13098 491 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 IZUMO3Q5VZ72 239 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 OTOP2Q7RTS6 562 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 SCD5Q86SK9 330 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 ZC3H18Q86VM9 953 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 CEP295NLQ96MC4 621 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 VN1R3Q9BXE9 311 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 AAASQ9NRG9 546 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 SPG21Q9NZD8 308 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 ATP8A1Q9Y2Q0 1164 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 MRPL42Q9Y6G3 142 aaKnown RBP16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 MYO16Q9Y6X6 1858 aa16.29■□□□□ 0.2
HERPUD1-201ENST00000300302 A0A1W2PQH9 124 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 EEF2KO00418 725 aaKnown RBP16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 OR1D2P34982 312 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 HSD17B3P37058 310 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 GLUD2P49448 558 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 PSEN1P49768 467 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 FAM193AP78312 1265 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 DUSP4Q13115 394 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 XRCC4Q13426 336 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 BRMS1LQ5PSV4 323 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 PCGF5Q86SE9 256 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 C7orf61Q8IZ16 206 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 GOLGA6L1Q8N7Z2 621 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 UBLCP1Q8WVY7 318 aaPredicted RBP16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 MAGEB5Q9BZ81 275 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 TKTL2Q9H0I9 626 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
HERPUD1-201ENST00000300302 FAM92AA1XBS5 289 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 WDR27A2RRH5 827 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 ZBBXA8MT70 800 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 C2CD2LO14523 706 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 DNALI1O14645 258 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 IRAK2O43187 625 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 OPA1O60313 960 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 FGBP02675 491 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 ZSCAN5DPP0CG00 497 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 AMPD1P23109 780 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 ACTN2P35609 894 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 PPM1AP35813 382 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 GGCXP38435 758 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 HCAR3P49019 387 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 TUFMP49411 452 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 PMS2P54278 862 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 DSG1Q02413 1049 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 RHBDF2Q6PJF5 856 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 CEP128Q6ZU80 1094 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 RFX8Q6ZV50 586 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 CDKL3Q8IVW4 592 aaPredicted RBP16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 IQCKQ8N0W5 287 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 GLIS1Q8NBF1 620 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 FBXO32Q969P5 355 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 TXLNGYQ9BZA5 131 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 FOXP3Q9BZS1 431 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 NMUR1Q9HB89 426 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 TMPRSS4Q9NRS4 437 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 TPX2Q9ULW0 747 aaKnown RBP16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 PLXNA3P51805 1871 aa16.27■□□□□ 0.2
HERPUD1-201ENST00000300302 TP73O15350 636 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 SOAT2O75908 522 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 VNN2O95498 520 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 ETS1P14921 441 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 CCR1P32246 355 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 GDF10P55107 478 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 USP46P62068 366 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 FPGSQ05932 587 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 EIF4EBP2Q13542 120 aaPredicted RBP16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 NCBP2-AS2Q69YL0 99 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 PRUNE1Q86TP1 453 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 UNC45BQ8IWX7 931 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 FAM71DQ8N9W8 422 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 GPR152Q8TDT2 470 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 BADQ92934 168 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 SERPINB11Q96P15 392 aa16.27■□□□□ 0.19
HERPUD1-201ENST00000300302 ZIM3Q96PE6 472 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms