RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ZNF512Q96ME7 567 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 LENG8Q96PV6 779 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PKP2Q99959 881 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 EFR3BQ9Y2G0 817 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GOLGA8QA0A0J9YX86 632 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GOLGA8OA6NCC3 632 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GOLGA8NF8WBI6 632 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GSRP00390 522 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TFPTP0C1Z6 253 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 XRCC1P18887 633 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PRKCHP24723 683 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 VARSP26640 1264 aaKnown RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 MIPP30301 263 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ARRB2P32121 409 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 KLF10Q13118 480 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 LILRA2Q8N149 483 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GSDMBQ8TAX9 411 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GRIN3AQ8TCU5 1115 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PGBD4Q96DM1 585 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 FRMD8P1Q9BZ68 369 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CAAP1Q9H8G2 361 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ADAMTSL1Q8N6G6 1762 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 SLC15A5A6NIM6 579 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 CHADO15335 359 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 FOXD2O60548 495 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TCN1P20061 433 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 RBL1P28749 1068 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 GABRB2P47870 512 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ENTPD1P49961 510 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 THOP1P52888 689 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TAP1Q03518 808 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 KCTD21Q4G0X4 260 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PTPN20Q4JDL3 420 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 NIPA2Q8N8Q9 360 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 TSPAN14Q8NG11 270 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 OXCT2Q9BYC2 517 aaPredicted RBP13.43□□□□□ -0.26
TVP23A-201ENST00000299866 ANLNQ9NQW6 1124 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PLK2Q9NYY3 685 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 EMCNQ9ULC0 261 aa13.43□□□□□ -0.26
TVP23A-201ENST00000299866 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
TVP23A-201ENST00000299866 SERPINE1P05121 402 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 PDGFRBP09619 1106 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 PPM1JQ5JR12 505 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 PPM1LQ5SGD2 360 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 SORT1Q99523 831 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 HAPLN2Q9GZV7 340 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 ANKEF1Q9NU02 776 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 GABBR1Q9UBS5 961 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 RBBP6Q7Z6E9 1792 aaKnown RBP13.42□□□□□ -0.26
TVP23A-201ENST00000299866 TPP1O14773 563 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
TVP23A-201ENST00000299866 ORC1Q13415 861 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 APOFQ13790 326 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 PRKG1Q13976 671 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 BHLHE22Q8NFJ8 381 aaPredicted RBP13.42□□□□□ -0.26
TVP23A-201ENST00000299866 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 PFDN4Q9NQP4 134 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 ACSS2Q9NR19 701 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
TVP23A-201ENST00000299866 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
TVP23A-201ENST00000299866 NEMP1O14524 444 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 THRAP10827 490 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 ENO3P13929 434 aaPredicted RBP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PSMC3P17980 439 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 ADORA2AP29274 412 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 GRIA1P42261 906 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PSMD7P51665 324 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 NAA20P61599 178 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PCLAFQ15004 111 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 SH3PXD2AQ5TCZ1 1133 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 SNX32Q86XE0 403 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 ZNF358Q9NW07 568 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PIH1D1Q9NWS0 290 aaKnown RBP13.41□□□□□ -0.26
TVP23A-201ENST00000299866 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 RRN3Q9NYV6 651 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PAK5Q9P286 719 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 STK39Q9UEW8 545 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 NRAPQ86VF7 1730 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 PLIN3O60664 434 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 NOMO1Q15155 1222 aa13.41□□□□□ -0.26
TVP23A-201ENST00000299866 FSCBQ5H9T9 825 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms