RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MPP5Q8N3R9 675 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CLEC4CQ8WTT0 213 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 WDR60Q8WVS4 1066 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 SNRNP25Q9BV90 132 aaKnown RBP13.91□□□□□ -0.18
CTDP1-202ENST00000299543 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 PAK5Q9P286 719 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 HESX1Q9UBX0 185 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 TNFSF13BQ9Y275 285 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 TEX264Q9Y6I9 313 aa13.91□□□□□ -0.18
CTDP1-202ENST00000299543 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 C2CD4BA6NLJ0 364 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 H3BRJ5 948 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 FCHO1O14526 889 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 SESN2P58004 480 aaPredicted RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 CCDC14Q49A88 953 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 ACSBG2Q5FVE4 666 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 C16orf46Q6P387 395 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 SULF1Q8IWU6 871 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 PCDH19Q8TAB3 1148 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 MZB1Q8WU39 189 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 TTC1Q99614 292 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 BCO2Q9BYV7 579 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 IL1RAPL1Q9NZN1 696 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 B2RBV5 119 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 E7ESA3 106 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 PPEF2O14830 753 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 USP1O94782 785 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 STK10O94804 968 aaKnown RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 SLC18A1P54219 525 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 BST1Q10588 318 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 CCDC142Q17RM4 750 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 LGSNQ5TDP6 509 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 TTC39BQ5VTQ0 682 aaPredicted RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 RINLQ6ZS11 566 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 FAM161BQ96MY7 647 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 DDX18Q9NVP1 670 aaKnown RBP13.9□□□□□ -0.18
CTDP1-202ENST00000299543 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
CTDP1-202ENST00000299543 FER1L6Q2WGJ9 1857 aa13.9□□□□□ -0.19
CTDP1-202ENST00000299543 BOLA2-SMG1P6H3BVE0 249 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 RASA2Q15283 850 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 DEPDC1BQ8WUY9 529 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 NDRG1Q92597 394 aaKnown RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 TRAPPC9Q96Q05 1148 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 BTBD10Q9BSF8 475 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 IFT122Q9HBG6 1241 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 USP29Q9HBJ7 922 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 METTL18O95568 372 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 VHLP40337 213 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 RBP5P82980 135 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 ATXN7L3BQ96GX2 97 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 SHCBP1LQ9BZQ2 653 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 PCDH18Q9HCL0 1135 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 GPRC5DQ9NZD1 345 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 PHIPQ8WWQ0 1821 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 CEP350Q5VT06 3117 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 WFS1O76024 890 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 LYNP07948 512 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 F7P08709 466 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 PROZP22891 400 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 EDNRBP24530 442 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 PGM1P36871 562 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 GALK1P51570 392 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 COG7P83436 770 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 CDK16Q00536 496 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 CES3Q6UWW8 571 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 AZIN2Q96A70 460 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 OXNAD1Q96HP4 312 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 FRMD8P1Q9BZ68 369 aaPredicted RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 SMYD2Q9NRG4 433 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 ERAP1Q9NZ08 941 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 MTO1Q9Y2Z2 717 aaKnown RBP13.89□□□□□ -0.19
CTDP1-202ENST00000299543 MFHAS1Q9Y4C4 1052 aa13.89□□□□□ -0.19
CTDP1-202ENST00000299543 FZD9O00144 591 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 GSC2O15499 205 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 CSH1P0DML2 217 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 CSH2P0DML3 217 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 CYP2F1P24903 491 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 AQP5P55064 265 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 LRRC74BQ6ZQY2 392 aa13.88□□□□□ -0.19
CTDP1-202ENST00000299543 LCA5Q86VQ0 697 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms