RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CITED4Q96RK1 184 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NOTOA8MTQ0 251 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PDE2AO00408 941 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PROZP22891 400 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TFDP3Q5H9I0 405 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 VWA5B1Q5TIE3 1220 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 C3orf62Q6ZUJ4 267 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CLVS1Q8IUQ0 354 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CCNYQ8ND76 341 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ADCY4Q8NFM4 1077 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 OR14K1Q8NGZ2 314 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CRELD1Q96HD1 420 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SP140LQ9H930 580 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CYP4F12Q9HCS2 524 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CCDC177Q9NQR7 707 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 MTMR10Q9NXD2 777 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 KLHL28Q9NXS3 571 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GABBR1Q9UBS5 961 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GIT1Q9Y2X7 761 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NPATQ14207 1427 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NCOA3Q9Y6Q9 1424 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 A0A0D9SFI3 127 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CLRN2A0PK11 232 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 RNMTO43148 476 aaKnown RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NUDT7P0C024 238 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GZMAP12544 262 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PAX3P23760 479 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 SFNP31947 248 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 NAMPTP43490 491 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 RGS7P49802 495 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 GNA12Q03113 381 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 DLG2Q15700 870 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ARMC6Q6NXE6 501 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CNSTQ6PJW8 725 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 TBC1D21Q8IYX1 336 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CACTIN-AS1Q8N1I8 211 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ANKS1AQ92625 1134 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 EMILIN2Q9BXX0 1053 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 COPS7BQ9H9Q2 264 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 CD93Q9NPY3 652 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 MKS1Q9NXB0 559 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 PTTG3PQ9NZH4 202 aa4.96□□□□□ -1.62
CSMD3-201ENST00000297405 INO80Q9ULG1 1556 aaPredicted RBP4.96□□□□□ -1.62
CSMD3-201ENST00000297405 ROS1P08922 2347 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 AIM2O14862 343 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 RFC5P40937 340 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CBX5P45973 191 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SKIV2LQ15477 1246 aaKnown RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 FAM47AQ5JRC9 791 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 C11orf63Q6NUN7 778 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 BHLHB9Q6PI77 547 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ACTRT2Q8TDY3 377 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CEP295NLQ96MC4 621 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 MTMR9Q96QG7 549 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ACTR6Q9GZN1 396 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 MAPK9P45984 424 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ACCSLQ4AC99 568 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 TNNI3KQ59H18 835 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 GPRC6AQ5T6X5 926 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SNRNP48Q6IEG0 339 aaKnown RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CCDC24Q8N4L8 307 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PPM1NQ8N819 430 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SSH3Q8TE77 659 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 GATAD2BQ8WXI9 593 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PPP1R14AQ96A00 147 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ARL8AQ96BM9 186 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ERGIC2Q96RQ1 377 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 GPATCH1Q9BRR8 931 aaKnown RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CLN6Q9NWW5 311 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PHTF1Q9UMS5 762 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PCDHA4Q9UN74 947 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PLAGL2Q9UPG8 496 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 FPGT-TNNI3KV9GXZ4 949 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 K7ERI5 159 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 WASLO00401 505 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 IFRD1O00458 451 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SHOX2O60902 331 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 RPN2P04844 631 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ALDH3A2P51648 485 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 JAK3P52333 1124 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PFKFB3Q16875 520 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 MSANTD1Q6ZTZ1 278 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SPATA6LQ8N4H0 392 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 DENND6BQ8NEG7 585 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 EPB41L4AQ9HCS5 686 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CATSPERZQ9NTU4 200 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 NDUFAF4Q9P032 175 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SUCOQ9UBS9 1254 aaKnown RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 SNX13Q9Y5W8 968 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 C3orf70A6NLC5 250 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ECT2LQ008S8 904 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 CREMQ03060 361 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 FGL1Q08830 312 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ITGA7Q13683 1181 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 PDK1Q15118 436 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 RFTN2Q52LD8 501 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 GPR158Q5T848 1215 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF57Q68EA5 555 aaPredicted RBP4.95□□□□□ -1.62
CSMD3-201ENST00000297405 MCFD2Q8NI22 146 aa4.95□□□□□ -1.62
CSMD3-201ENST00000297405 RNF139Q8WU17 664 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms