RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 SRP54P61011 504 aaKnown RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 PTSQ03393 145 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 TNK2Q07912 1038 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 SCRN3Q0VDG4 424 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 MPP3Q13368 585 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 POLD3Q15054 466 aaPredicted RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 CXXC5Q7LFL8 322 aaKnown RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 SIX5Q8N196 739 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 LRRC71Q8N4P6 559 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 ITFG1Q8TB96 612 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 DPF2Q92785 391 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 CELF4Q9BZC1 486 aaKnown RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 RIBC2Q9H4K1 309 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 ENTPD7Q9NQZ7 604 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 KPNA5O15131 536 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 PSMG1O95456 288 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 CPSF4O95639 269 aaKnown RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 CAPGP40121 348 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.37
SNRK-201ENST00000296088 SLC15A2Q16348 729 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 KDELC2Q7Z4H8 507 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 PROX1Q92786 737 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 SLITRK1Q96PX8 696 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.37
SNRK-201ENST00000296088 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 METTL21EPA6NDL7 271 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 INPP4BO15327 924 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SERPINA1P01009 418 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 KLRC1P26715 233 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 HOXD10P28358 340 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SIK1P57059 783 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 NR6A1Q15406 480 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 RIPOR1Q6ZS17 1223 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SYTL5Q8TDW5 730 aaPredicted RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 EPS8L3Q8TE67 593 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 MTIF3Q9H2K0 278 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 CLN6Q9NWW5 311 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 RPS6KA6Q9UK32 745 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PNMA8BQ9ULN7 279 aaPredicted RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 FAM92AA1XBS5 289 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L15C9J2P7 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L13C9JLJ4 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L11C9JVI0 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L18D6R9N7 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L22D6RA61 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L17D6RBQ6 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L19D6RCP7 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L20D6RJB6 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 ITGA2P17301 1181 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 LBPP18428 481 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SLC11A2P49281 568 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L24Q0WX57 530 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USPL1Q5W0Q7 1092 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 USP17L6PQ6QN14 398 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 KYAT3Q6YP21 454 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 FAM172AQ8WUF8 416 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PGM2Q96G03 612 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 MAGEB10Q96LZ2 347 aaPredicted RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 QRFPRQ96P65 431 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 TMEM138Q9NPI0 162 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PNPLA3Q9NST1 481 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 GYPCP04921 128 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 PDHBP11177 359 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 CDK16Q00536 496 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 FASTKQ14296 549 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 SWI5Q1ZZU3 235 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 RBM20Q5T481 1227 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 NT5DC4Q86YG4 428 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 APOPT1Q96IL0 206 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 CDC42EP4Q9H3Q1 356 aaKnown RBP12.76□□□□□ -0.37
SNRK-201ENST00000296088 AGPAT5Q9NUQ2 364 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 CORO2BQ9UQ03 480 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNRK-201ENST00000296088 H3BN98 237 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 OR6B1O95007 311 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 HLA-DRAP01903 254 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 HSF2Q03933 536 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 QRICH1Q2TAL8 776 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 TUBA3EQ6PEY2 450 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 RNF149Q8NC42 400 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 RASSF5Q8WWW0 418 aa12.76□□□□□ -0.37
SNRK-201ENST00000296088 PTCD3Q96EY7 689 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms