RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 IARS2Q9NSE4 1012 aaKnown RBP18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 SCOCQ9UIL1 159 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 PTCH2Q9Y6C5 1203 aa18.21■□□□□ 0.51
CDC42EP3-201ENST00000295324 PHKG1Q16816 387 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 PIP4K2CQ8TBX8 421 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 ELMO3Q96BJ8 720 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 PRKD2Q9BZL6 878 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 FAM32AQ9Y421 112 aaKnown RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 KPNA3O00505 521 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 AMPD1P23109 780 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 PBLDP30039 288 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 CASP5P51878 434 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 BCL2L1Q07817 233 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 PCDH9Q9HC56 1237 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 BTBD7Q9P203 1132 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 MARCOQ9UEW3 520 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 DDX20Q9UHI6 824 aaKnown RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 HNRNPCL1O60812 293 aaKnown RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 MDH1P40925 334 aaKnown RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 PLCL1Q15111 1095 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SYCE1LA8MT33 242 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 ADRB2P07550 413 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SPATA31C1P0DKV0 1188 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SHROOM1Q2M3G4 852 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 NOA1Q8NC60 698 aaKnown RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 HTR3CQ8WXA8 447 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 DCDC2Q9UHG0 476 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 VANGL2Q9ULK5 521 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 HNRNPCL2B2RXH8 293 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 ARF4P18085 180 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 HPCAP84074 193 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 UGCGQ16739 394 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 UBP1Q9NZI7 540 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 DERAQ9Y315 318 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 DYRK1BQ9Y463 629 aa18.2■□□□□ 0.5
CDC42EP3-201ENST00000295324 SUPT7LO94864 414 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 GNRH1P01148 92 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 ALOX15P16050 662 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 MSH3P20585 1137 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 LRRC74AQ0VAA2 488 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 LVRNQ6Q4G3 990 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 SH3BP5LQ7L8J4 393 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 C11orf96Q7Z7L8 435 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 RFWD2Q8NHY2 731 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 COPS7BQ9H9Q2 264 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 UTP6Q9NYH9 597 aaKnown RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 TMEM120BA0PK00 339 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 HACD1B0YJ81 288 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 FGF10O15520 208 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 CXCL14O95715 111 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 NT5DC3Q86UY8 548 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 PABPC3Q9H361 631 aaKnown RBP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 B4GALT5O43286 388 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 KLHL2O95198 593 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 FGBP02675 491 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 MIPP30301 263 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 GUCY1A3Q02108 690 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 TP53BP2Q13625 1128 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 ANKRD52Q8NB46 1076 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 OR2W6PQ8NHA6 318 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 STOML1Q9UBI4 398 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 NUDT5Q9UKK9 219 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 MOXD2PA6NHM9 499 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 CNTFP26441 200 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 SMARCB1Q12824 385 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 TPGS1Q6ZTW0 290 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 NUP93Q8N1F7 819 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 NEUROG2Q9H2A3 272 aa18.19■□□□□ 0.5
CDC42EP3-201ENST00000295324 TRPC5OSA6NMA1 111 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ICAM3P32942 547 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 NDUFV1P49821 464 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 EIF2AQ9BY44 585 aaKnown RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 TEKT2Q9UIF3 430 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ZW10O43264 779 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 MPP3Q13368 585 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PATL1Q86TB9 770 aaKnown RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 KAT2BQ92831 832 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PPP1R16AQ96I34 528 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 WDR41Q9HAD4 459 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 RBP1P09455 135 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 DLG4P78352 724 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 DDX39BQ13838 428 aaKnown RBP18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PIGZQ86VD9 579 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 TOP6BLQ8N6T0 577 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 PNKPQ96T60 521 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 NPHS2Q9NP85 383 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 FAM237AA0A1B0GTK4 181 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 GLUD1P00367 558 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 GJB1P08034 283 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 AP2B1P63010 937 aa18.18■□□□□ 0.5
CDC42EP3-201ENST00000295324 INPP5AQ14642 412 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms