RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SENP6Q9GZR1 1112 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 IQCMA0A1B0GVH7 501 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 AREL1O15033 823 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 UBDO15205 165 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 GJB6O95452 261 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 CYP2F1P24903 491 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 DPP10Q8N608 796 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SYN2Q92777 582 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 KLHL3Q9UH77 587 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 CCDC154A6NI56 674 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PIK3CDO00329 1044 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 FGFR1P11362 822 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 TERB1Q8NA31 727 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 OXNAD1Q96HP4 312 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SERAC1Q96JX3 654 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 BTBD10Q9BSF8 475 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 TBCDQ9BTW9 1192 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 MBD2Q9UBB5 411 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 AP4E1Q9UPM8 1137 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 AP5Z1O43299 807 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 LBPP18428 481 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PKNOX1P55347 436 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 IFI35P80217 286 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 TCEA2Q15560 299 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 FGD3Q5JSP0 725 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SDE2Q6IQ49 451 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 ENKURQ8TC29 256 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SH3BP4Q9P0V3 963 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 ADAM30Q9UKF2 790 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 AAR2Q9Y312 384 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PHGDHO43175 533 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 CALCAP01258 141 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 EIF2S1P05198 315 aaKnown RBP16.53■□□□□ 0.24
SSRP1-202ENST00000293880 MGAT1P26572 445 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PKN1Q16512 942 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PACS2Q86VP3 889 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PPP1R2P1Q96PQ5 205 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 SEMA4AQ9H3S1 761 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 VANGL2Q9ULK5 521 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 PPP2R3BQ9Y5P8 575 aa16.53■□□□□ 0.24
SSRP1-202ENST00000293880 CYB561D2O14569 222 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 NR6A1Q15406 480 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 LRRC74BQ6ZQY2 392 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 DEFB132Q7Z7B7 95 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 LRRC6Q86X45 466 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 KCND2Q9NZV8 630 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 CNOT7Q9UIV1 285 aaKnown RBP16.52■□□□□ 0.24
SSRP1-202ENST00000293880 CBX4O00257 560 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 MAGEA10P43363 369 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-202ENST00000293880 NCKAP1LP55160 1127 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 OXCT1P55809 520 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 PERM1Q5SV97 790 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 PHACTR4Q8IZ21 702 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 BHLHE22Q8NFJ8 381 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-202ENST00000293880 RNF145Q96MT1 663 aa16.52■□□□□ 0.24
SSRP1-202ENST00000293880 GLP2RO95838 553 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 ZNF37AP17032 561 aaPredicted RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 RRM1P23921 792 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FASTKQ14296 549 aaKnown RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 TFAP2DQ7Z6R9 452 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 HDAC7Q8WUI4 952 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 EDEM1Q92611 657 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 QKIQ96PU8 341 aaKnown RBP eCLIP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 DCLRE1BQ9H816 532 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FAM86B1E9PN63 330 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 CDC40O60508 579 aaKnown RBP eCLIP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 ITGA3P26006 1051 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 YWHAQP27348 245 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 ITGA9Q13797 1035 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FBXO25Q8TCJ0 367 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 TCP10LQ8TDR4 215 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 HNRNPLLQ8WVV9 542 aaKnown RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FOXP3Q9BZS1 431 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 C17orf102A2RUQ5 167 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 CASTOR2A6NHX0 329 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 TFRCP02786 760 aaKnown RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 MAPK1P28482 360 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 NOS3P29474 1203 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 TALDO1P37837 337 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 CCSAPQ6IQ19 270 aaPredicted RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 FBXO32Q969P5 355 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 LIMD1Q9UGP4 676 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 USP20Q9Y2K6 914 aa16.52■□□□□ 0.23
SSRP1-202ENST00000293880 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.23
SSRP1-202ENST00000293880 CNTNAP2Q9UHC6 1331 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ZMPSTE24O75844 475 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 HPGDP15428 266 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 RPL21P46778 160 aaKnown RBP16.51■□□□□ 0.23
SSRP1-202ENST00000293880 CLCN3P51790 818 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 PACSIN3Q9UKS6 424 aa16.51■□□□□ 0.23
SSRP1-202ENST00000293880 ADSLP30566 484 aaPredicted RBP16.51■□□□□ 0.23
SSRP1-202ENST00000293880 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms