RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TRAF7Q6Q0C0 670 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 PPP2R3CQ969Q6 453 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 THAP2Q9H0W7 228 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM245Q9H330 911 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 TAGLN3Q9UI15 199 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 F8VZ95 297 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 HAS3O00219 553 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 CLCN3P51790 818 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 COBLL1Q53SF7 1204 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 IZUMO2Q6UXV1 221 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 BADQ92934 168 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 STMN3Q9NZ72 180 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNF839A8K0R7 811 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 H2AFYO75367 372 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 PCBP1Q15365 356 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■■ 27.3
SYNGAP1-201ENST00000293748 MROH9Q5TGP6 573 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 ACAD10Q6JQN1 1059 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 NAT9Q9BTE0 207 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 CCDC78A2IDD5 438 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 CARNS1A5YM72 827 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 GOLGA8TH3BQL2 631 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 ADCY6O43306 1168 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 VCPP55072 806 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 RBP5P82980 135 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM62Q0P6H9 643 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 KRT33BQ14525 404 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 ANO4Q32M45 955 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 EFHC1Q5JVL4 640 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 MEI1Q5TIA1 1274 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 CNKSR3Q6P9H4 555 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 TAS2R42Q7RTR8 314 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 KAT2BQ92831 832 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 ELMO2Q96JJ3 720 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 HLA-DRAP01903 254 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 GZMAP12544 262 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 CRYBB1P53674 252 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 SNX17Q15036 470 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 BOLA3Q53S33 107 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 SYCP2LQ5T4T6 812 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 RNF149Q8NC42 400 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 MED15Q96RN5 788 aa12.19□□□□□ -0.46
SYNGAP1-201ENST00000293748 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TM9SF1O15321 606 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 GLI1P08151 1106 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 CYP11B2P19099 503 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TRAPPC12Q8WVT3 735 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RMDN1Q96DB5 314 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 ASIC4Q96FT7 647 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 GCNAQ96QF7 691 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 FAM118BQ9BPY3 351 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SPON2Q9BUD6 331 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 EPS8L2Q9H6S3 715 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 C17orf75Q9HAS0 396 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 APPL1Q9UKG1 709 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 ABHD14A-ACY1A0A1B0GW23 586 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SRRM3A6NNA2 597 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 PRR23D1E9PI22 279 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 EML1O00423 815 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 MAFO75444 373 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 DGKIO75912 1065 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 PRKCBP05771 671 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 PRR23D2P0DMB1 279 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 GRK2P25098 689 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RASA2Q15283 850 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 RAB30Q15771 203 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 CCSAPQ6IQ19 270 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 IRGCQ6NXR0 463 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 YTHDF3Q7Z739 585 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 MTDHQ86UE4 582 aaKnown RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 BBS7Q8IWZ6 715 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 URGCPQ8TCY9 931 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 ZNF669Q96BR6 464 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 DCDC2Q9UHG0 476 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLITRK3O94933 977 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 FKBP9O95302 570 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 SLC34A1Q06495 639 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 MKRN4PQ13434 485 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 FKBP9P1Q75LS8 142 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 TMEM161AQ9NX61 479 aa12.18□□□□□ -0.46
SYNGAP1-201ENST00000293748 DFFAO00273 331 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms