RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SMIM31A0A1B0GVY4 71 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 TBX3O15119 743 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 UBDO15205 165 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 MAPK10P53779 464 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 TUBA4AP68366 448 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 DGKDQ16760 1214 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 EPHX4Q8IUS5 362 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM9CQ8IZT9 166 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 CNPY3Q9BT09 278 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 SYNDIG1Q9H7V2 258 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 EBF2Q9HAK2 575 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 VPS26AO75436 327 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 IFNA14P01570 189 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 MAPK1P28482 360 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 GOLGA7BQ2TAP0 167 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 PGS1Q32NB8 556 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 NECAB2Q7Z6G3 386 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 SVOPQ8N4V2 548 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 NSMCE2Q96MF7 247 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 TRIM39Q9HCM9 518 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ACOT9Q9Y305 439 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 RFC5P40937 340 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 DDR2Q16832 855 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 ZSWIM7Q19AV6 140 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 TCHHL1Q5QJ38 904 aaPredicted RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 TATDN2Q93075 761 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 KCTD14Q9BQ13 255 aaPredicted RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 BDH2Q9BUT1 245 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 KRCC1Q9NPI7 259 aaPredicted RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNRF3Q9ULT6 936 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 KCPQ6ZWJ8 1503 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 PTGES3LE9PB15 166 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 FCHO1O14526 889 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 INPP4BO15327 924 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 CBFA2T3O75081 653 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 TADA2AO75478 443 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 GEMP55040 296 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 DGUOKQ16854 277 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM98BQ52LJ0 330 aaKnown RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 PLA2G4FQ68DD2 849 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 PRMT9Q6P2P2 845 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 TDRD5Q8NAT2 981 aaKnown RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 STK32AQ8WU08 396 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 OSCP1Q8WVF1 389 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 LRRC40Q9H9A6 602 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 NMRK2Q9NPI5 230 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 TCF7L2Q9NQB0 619 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 IARS2Q9NSE4 1012 aaKnown RBP11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 COMMD8Q9NX08 183 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 POLLQ9UGP5 575 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 SLC24A2Q9UI40 661 aa11.02□□□□□ -0.64
PKNOX1-201ENST00000291547 EIF3DO15371 548 aaKnown RBP eCLIP11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 IL6P05231 212 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 PCSK1P29120 753 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 BMPR2Q13873 1038 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 MACC1Q6ZN28 852 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 LRRC74BQ6ZQY2 392 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 STRA8Q7Z7C7 330 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 RNF148Q8N7C7 305 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 ABT1Q9ULW3 272 aaKnown RBP11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 PDE9AO76083 593 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 LDLRP01130 860 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 CD4P01730 458 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 GSSP48637 474 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 EMC2Q15006 297 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 STK32CQ86UX6 486 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 AHI1Q8N157 1196 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 IGDCC4Q8TDY8 1250 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 DNAJC7Q99615 494 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 BTBD10Q9BSF8 475 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 LACRTQ9GZZ8 138 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 MROH7Q68CQ1 1323 aa11.02□□□□□ -0.65
PKNOX1-201ENST00000291547 MGAT4DA6NG13 374 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 FOXN3O00409 490 aaPredicted RBP11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 TM9SF1O15321 606 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 RAG1P15918 1043 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 C2CD6Q53TS8 623 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 MRPL48Q96GC5 212 aaKnown RBP11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 SEMA4AQ9H3S1 761 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 DOLKQ9UPQ8 538 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 NAALADL1Q9UQQ1 740 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 ANKRD33BA6NCL7 494 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 ASB14A6NK59 587 aa11.01□□□□□ -0.65
PKNOX1-201ENST00000291547 RBP1P09455 135 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms