RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 LTB4R2Q9NPC1 389 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 SPHK2Q9NRA0 654 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 ABHD10Q9NUJ1 306 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 TMEM51Q9NW97 253 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 TAS2R14Q9NYV8 317 aa28.02■■■□□ 2.08
SSU72-201ENST00000291386 TCRBV5S1A1TA0A578 114 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 GOLGA8SH3BPF8 625 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 ADH1CP00326 375 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 CHKAP35790 457 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 WDR59Q6PJI9 974 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 DENND1CQ8IV53 801 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 CNGA4Q8IV77 575 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 CPXM2Q8N436 756 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 C3orf20Q8ND61 904 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 ADAM32Q8TC27 787 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 MARK1Q9P0L2 795 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 ARHGAP20Q9P2F6 1191 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 STAP1Q9ULZ2 295 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 MYOFQ9NZM1 2061 aa28.01■■■□□ 2.07
SSU72-201ENST00000291386 PLEKP08567 350 aaPredicted RBP28■■■□□ 2.07
SSU72-201ENST00000291386 AOC1P19801 751 aa28■■■□□ 2.07
SSU72-201ENST00000291386 GBP1P32455 592 aa28■■■□□ 2.07
SSU72-201ENST00000291386 PITX1P78337 314 aaPredicted RBP28■■■□□ 2.07
SSU72-201ENST00000291386 GAD2Q05329 585 aa28■■■□□ 2.07
SSU72-201ENST00000291386 GAB4Q2WGN9 574 aa28■■■□□ 2.07
SSU72-201ENST00000291386 LY6G5CQ5SRR4 150 aa28■■■□□ 2.07
SSU72-201ENST00000291386 TXNDC11Q6PKC3 985 aa28■■■□□ 2.07
SSU72-201ENST00000291386 ZNF687Q8N1G0 1237 aa28■■■□□ 2.07
SSU72-201ENST00000291386 FLCNQ8NFG4 579 aa28■■■□□ 2.07
SSU72-201ENST00000291386 PGAP3Q96FM1 320 aaPredicted RBP28■■■□□ 2.07
SSU72-201ENST00000291386 LRFN3Q9BTN0 628 aa28■■■□□ 2.07
SSU72-201ENST00000291386 ISCUQ9H1K1 167 aa28■■■□□ 2.07
SSU72-201ENST00000291386 AKR1B15C9JRZ8 316 aaPredicted RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 TRDMT1O14717 391 aaKnown RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 HOXC11O43248 304 aaPredicted RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 RTN2O75298 545 aa27.99■■■□□ 2.07
SSU72-201ENST00000291386 FLT3P36888 993 aa27.99■■■□□ 2.07
SSU72-201ENST00000291386 RNASE9P60153 205 aaKnown RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 ASTLQ6HA08 431 aaPredicted RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 PJA1Q8NG27 643 aa27.99■■■□□ 2.07
SSU72-201ENST00000291386 METTL5Q9NRN9 209 aaKnown RBP27.99■■■□□ 2.07
SSU72-201ENST00000291386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.99■■■□□ 2.07
SSU72-201ENST00000291386 ADAMTS1Q9UHI8 967 aa27.99■■■□□ 2.07
SSU72-201ENST00000291386 SIGLEC16A6NMB1 481 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 ADH5P11766 374 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 CD72P21854 359 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 ADKP55263 362 aaKnown RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 MAPK8IP2Q13387 824 aaPredicted RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 TSR1Q2NL82 804 aaKnown RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 SLC25A52Q3SY17 297 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 OTUD1Q5VV17 481 aaPredicted RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 TRNP1Q6NT89 227 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 BNIPLQ7Z465 357 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 TMEM25Q86YD3 366 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 EXOC4Q96A65 974 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 IRX2Q9BZI1 471 aaPredicted RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 FAM204AQ9H8W3 233 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 ZNHIT6Q9NWK9 470 aaKnown RBP27.98■■■□□ 2.07
SSU72-201ENST00000291386 DDIT4Q9NX09 232 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 MIA3Q5JRA6 1907 aa27.98■■■□□ 2.07
SSU72-201ENST00000291386 SSU72P8A0A1W2PR75 194 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 TMCO5BA8MYB1 307 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 GFRA2O00451 464 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 F9P00740 461 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 FTLP02792 175 aaPredicted RBP27.97■■■□□ 2.07
SSU72-201ENST00000291386 SLC2A3P11169 496 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 KRT3P12035 628 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 TARSP26639 723 aaKnown RBP27.97■■■□□ 2.07
SSU72-201ENST00000291386 EIF2DP41214 584 aaKnown RBP27.97■■■□□ 2.07
SSU72-201ENST00000291386 ADGRF1Q5T601 910 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 SUGP1Q8IWZ8 645 aaKnown RBP27.97■■■□□ 2.07
SSU72-201ENST00000291386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.97■■■□□ 2.07
SSU72-201ENST00000291386 SELENOOQ9BVL4 669 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 FOXQ1Q9C009 403 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 SIT1Q9Y3P8 196 aa27.97■■■□□ 2.07
SSU72-201ENST00000291386 FAM170BA6NMN3 283 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 M0QYT0 321 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 STK25O00506 426 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 ACSL4O60488 711 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 RRM1P23921 792 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 OPRD1P41143 372 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 SLC11A2P49281 568 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 MTA1Q13330 715 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 FZD5Q13467 585 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 PPP2R5DQ14738 602 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 TMEM196Q5HYL7 178 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 PPP1R15BQ5SWA1 713 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 PHLDB2Q86SQ0 1253 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 CCDC105Q8IYK2 499 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 ADAM33Q9BZ11 813 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 NENFQ9UMX5 172 aa27.96■■■□□ 2.07
SSU72-201ENST00000291386 MTF2Q9Y483 593 aaPredicted RBP27.96■■■□□ 2.07
SSU72-201ENST00000291386 A0A087X0T9 212 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 C2CD4BA6NLJ0 364 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 KCNU1A8MYU2 1149 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 NCAM2O15394 837 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 ENDOD1O94919 500 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 APOEP02649 317 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 FAM228BP0C875 321 aa27.95■■■□□ 2.06
SSU72-201ENST00000291386 CCR1P32246 355 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms