RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PRIM2P49643 509 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 LONRF1Q17RB8 773 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 LPCAT2Q7L5N7 544 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF669Q96BR6 464 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TINF2Q9BSI4 451 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ZBBXA8MT70 800 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PGK2P07205 417 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 MPP3Q13368 585 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 NTRK3Q16288 839 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 EXT2Q93063 718 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PDZK1P1A8MUH7 402 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 MLYCDO95822 493 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ABCB1P08183 1280 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CDC73Q6P1J9 531 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PRDM8Q9NQV8 689 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 MBD2Q9UBB5 411 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 KLHL3Q9UH77 587 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CCDC189A1A4V9 331 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 GUCA1CO95843 209 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 SERPINF2P08697 491 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PTPN3P26045 913 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 SESN2P58004 480 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 SH3BP5LQ7L8J4 393 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CYGBQ8WWM9 190 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PAFAH2Q99487 392 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 WWOXQ9NZC7 414 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 FCGRTP55899 365 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ARID5BQ14865 1188 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PAGE2BQ5JRK9 111 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 TMEM154Q6P9G4 183 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ADHFE1Q8IWW8 467 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CYP4F11Q9HBI6 524 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PRPF19Q9UMS4 504 aaKnown RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 FAM220BPB1ANY3 271 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 DNALI1O14645 258 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CYP2A6P11509 494 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 TGFBR2P37173 567 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 USE1Q9NZ43 259 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 BCL9O00512 1426 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CCDC195A0A1B0GUA6 201 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 BAATQ14032 418 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 KRT78Q8N1N4 520 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 CASKIN2Q8WXE0 1202 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF670Q9BS34 389 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 SMURF2Q9HAU4 748 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 WWP2O00308 870 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 LYPLA2O95372 231 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 DNAJB1P25685 340 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ITGADQ13349 1161 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 RETSATQ6NUM9 610 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 PPP4R4Q6NUP7 873 aa15.17■□□□□ 0.02
SEC16A-202ENST00000290037 AGO4Q9HCK5 861 aaKnown RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
SEC16A-202ENST00000290037 MYBP10242 640 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 NCAM1P13591 858 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 COPZ1P61923 177 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 SLC34A1Q06495 639 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 AAGABQ6PD74 315 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 CPA5Q8WXQ8 436 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF512Q96ME7 567 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 FAM47E-STBD1D6RA91 191 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 LZTS3O60299 673 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 LDOC1O95751 146 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 SNX31Q8N9S9 440 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 AASDHPPTQ9NRN7 309 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 C21orf2O43822 256 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 STRADAQ7RTN6 431 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 CAMK1DQ8IU85 385 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 TMEM132CQ8N3T6 1108 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 AP3S1Q92572 193 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 C18orf25Q96B23 403 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 PDGFRBP09619 1106 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 RASA2Q15283 850 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 SPOCD1Q6ZMY3 1216 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 TAS2R13Q9NYV9 303 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 CSE1LP55060 971 aaKnown RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 HYIQ5T013 277 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 KIAA2013Q8IYS2 634 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF184Q99676 751 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 LRRC19Q9H756 370 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 NDUFAF1Q9Y375 327 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 CD151P48509 253 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 RCN1Q15293 331 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 MTX3Q5HYI7 312 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 BRSK2Q8IWQ3 736 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 CCDC33Q8N5R6 958 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 DNAJB8Q8NHS0 232 aa15.16■□□□□ 0.02
SEC16A-202ENST00000290037 TMA16Q96EY4 203 aaKnown RBP15.16■□□□□ 0.02
SEC16A-202ENST00000290037 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms