RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 DHX58Q96C10 678 aa11.29□□□□□ -0.6
NSMCE2-201ENST00000287437 NUP58Q9BVL2 599 aa11.29□□□□□ -0.6
NSMCE2-201ENST00000287437 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
NSMCE2-201ENST00000287437 NAGPAQ9UK23 515 aa11.29□□□□□ -0.6
NSMCE2-201ENST00000287437 CLEC4EQ9ULY5 219 aa11.29□□□□□ -0.6
NSMCE2-201ENST00000287437 A0A087WV48 116 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 KCNK3O14649 394 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 NPC1O15118 1278 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 PRB1P04280 392 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 EPHX1P07099 455 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 HMBSP08397 361 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 PDCP20941 246 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SYT1P21579 422 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 AFF3P51826 1226 aaKnown RBP11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 DLG4P78352 724 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 AMPD3Q01432 767 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 EHHADHQ08426 723 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 ANKS1BQ7Z6G8 1248 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SCUBE3Q8IX30 993 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 C12orf56Q8IXR9 622 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 ADAM32Q8TC27 787 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 C6orf106Q9H6K1 298 aaPredicted RBP11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SLC39A2Q9NP94 309 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 ELOVL2Q9NXB9 296 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 RASAL2Q9UJF2 1139 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SNX11Q9Y5W9 270 aa11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
NSMCE2-201ENST00000287437 SETXQ7Z333 2677 aaKnown RBP11.27□□□□□ -0.6
NSMCE2-201ENST00000287437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 TNFSF14O43557 240 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 P4HA1P13674 534 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 HLA-EP13747 358 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 ACSL1P33121 698 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CHKAP35790 457 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 ASPAP45381 313 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 AP3M2P53677 418 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CLDN10P78369 228 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 STK38Q15208 465 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 SMAD1Q15797 465 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 PTPRNQ16849 979 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 TMEM215Q68D42 235 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CNNM4Q6P4Q7 775 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 DHRS13Q6UX07 377 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 SERPINA13PQ6UXR4 307 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 UNC13DQ70J99 1090 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 PIP4K2CQ8TBX8 421 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CUEDC2Q9H467 287 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 CGNQ9P2M7 1197 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 TFIP11Q9UBB9 837 aaKnown RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.27□□□□□ -0.61
NSMCE2-201ENST00000287437 H0Y8X5 98 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 KIF20AO95235 890 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 RALAP11233 206 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 GRK6P43250 576 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ABCG1P45844 678 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 NASPP49321 788 aaPredicted RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 CCT8P50990 548 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 KIF11P52732 1056 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 IL9RQ01113 521 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ARID5AQ03989 594 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 EFEMP1Q12805 493 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 CUL4AQ13619 759 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 EIF4HQ15056 248 aaKnown RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 TEAD4Q15561 434 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ZACNQ401N2 412 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 KCNT1Q5JUK3 1230 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 CCDC186Q7Z3E2 898 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 TADA2BQ86TJ2 420 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 DENND1CQ8IV53 801 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 ZNF366Q8N895 744 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 IQUBQ8NA54 791 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 OR2T3Q8NH03 318 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 DDI1Q8WTU0 396 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 COL26A1Q96A83 441 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 UBL7Q96S82 380 aaPredicted RBP11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 C7orf25Q9BPX7 421 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
NSMCE2-201ENST00000287437 TM9SF3Q9HD45 589 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms