RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 DNAJC1Q96KC8 554 aaKnown RBP13.82□□□□□ -0.2
SCAF4-201ENST00000286835 TPP1O14773 563 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PDGFRBP09619 1106 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PTPRAP18433 802 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 PTGER2P43116 358 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 CLCN3P51790 818 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 KRT72Q14CN4 511 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 TRPV6Q9H1D0 765 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 KRT82Q9NSB4 513 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 ARHGAP26Q9UNA1 814 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 SNX9Q9Y5X1 595 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RPS6KL1Q9Y6S9 549 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 RREB1Q92766 1687 aa13.82□□□□□ -0.2
SCAF4-201ENST00000286835 SMAPO00193 183 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 VWA5AO00534 786 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 GMPRP36959 345 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 GRIA1P42261 906 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 CCNG1P51959 295 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PRAMEP78395 509 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PDE1CQ14123 709 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 DBN1Q16643 649 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 CNPY1Q3B7I2 92 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 DRICH1Q6PGQ1 229 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 UNC5AQ6ZN44 842 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PHC3Q8NDX5 983 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SGF29Q96ES7 293 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 MARK4Q96L34 752 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PRPF18Q99633 342 aaKnown RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 TTLL13PA6NNM8 815 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 CYP2B6P20813 491 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 NME3Q13232 169 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 CAPSQ13938 189 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PPM1JQ5JR12 505 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SPDYAQ5MJ70 313 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SATL1Q86VE3 508 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 EZH1Q92800 747 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 RNF34Q969K3 372 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 KCNK16Q96T55 309 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PORCNQ9H237 461 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 NFKBIEO00221 500 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SORBS2O94875 1100 aaKnown RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 ERVK-10P10266 1014 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PMLP29590 882 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 TCF7P36402 384 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 SERPINB9P50453 376 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 AP3M2P53677 418 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 VGLL4Q14135 290 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PDK3Q15120 406 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 LAYNQ6UX15 382 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 PTAR1Q7Z6K3 402 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 ACOT1Q86TX2 421 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 C12orf29Q8N999 325 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 RDM1Q8NG50 284 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 FAM192AQ9GZU8 254 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
SCAF4-201ENST00000286835 MMADHCQ9H3L0 296 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 MYO18AQ92614 2054 aaKnown RBP13.81□□□□□ -0.2
SCAF4-201ENST00000286835 TRAFD1O14545 582 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 MGAT1P26572 445 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 SLC18A1P54219 525 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 GOLGA7BQ2TAP0 167 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 RAB6CQ53S08 254 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 CMC1Q7Z7K0 106 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ZNF354CQ86Y25 554 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 MPP5Q8N3R9 675 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 RAB6CQ9H0N0 254 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 C20orf96Q9NUD7 363 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 GTSE1Q9NYZ3 720 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 B4GALT5O43286 388 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ITM2AO43736 263 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 GPC4O75487 556 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 SEC24DO94855 1032 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 BPGMP07738 259 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ARL1P40616 181 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 EFNA5P52803 228 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ZSCAN18Q8TBC5 510 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 EME1Q96AY2 570 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 S100A14Q9HCY8 104 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 IRF6O14896 467 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 TGDSO95455 350 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 HNRNPCP07910 306 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCAF4-201ENST00000286835 SERPINA6P08185 405 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 PHKA2P46019 1235 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 ACTR3P61158 418 aa13.8□□□□□ -0.2
SCAF4-201ENST00000286835 MTHFD1LQ6UB35 978 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms