RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 C11orf54Q9H0W9 315 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 EPB41L4BQ9H329 900 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 AKIRIN1Q9H9L7 192 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 BCO1Q9HAY6 547 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 BEX4Q9NWD9 120 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 SLAMF8Q9P0V8 285 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 IGSF9Q9P2J2 1179 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 CPSF3Q9UKF6 684 aaKnown RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 SCAF8Q9UPN6 1271 aaKnown RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 OSGIN2Q9Y236 505 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 FMN2Q9NZ56 1722 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 C17orf113A0A1B0GUU1 675 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PRR33A8MZF0 331 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ZBTB14O43829 449 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PRICKLE3O43900 615 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 GMFGO60234 142 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ALDH1A2O94788 518 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 TMIGD3P0DMS9 266 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 COX7A2P14406 83 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 VPS41P49754 854 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 GATMP50440 423 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 NFATC3Q12968 1075 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PROSER3Q2NL68 480 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SGO2Q562F6 1265 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 CD300LDQ6UXZ3 194 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 BEND4Q6ZU67 534 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SIX6OS1Q8N1H7 587 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 LRRC71Q8N4P6 559 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ZFP28Q8NHY6 868 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PRPF31Q8WWY3 499 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 OR10A5Q9H207 317 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 MRPL46Q9H2W6 279 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 SEMA6BQ9H3T3 888 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SLC32A1Q9H598 525 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 KIF9Q9HAQ2 790 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 LRRC4CQ9HCJ2 640 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 TMEM161AQ9NX61 479 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PLA2G3Q9NZ20 509 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ACTR3BQ9P1U1 418 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 AMACRQ9UHK6 382 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 MYOM1P52179 1685 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 H3BQ06 376 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 MYO1FO00160 1098 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 CHL1O00533 1208 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SH2B2O14492 632 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 NRP1O14786 923 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 HAUS5O94927 633 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 CBX6O95503 412 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SBK2P0C263 348 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PCP11498 1178 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 PECAM1P16284 738 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 CTPS1P17812 591 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 NTSR1P30989 418 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 FLT3LGP49771 235 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 WNT3AP56704 352 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 UFM1P61960 85 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PIGFQ07326 219 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SF3A3Q12874 501 aaKnown RBP eCLIP2.9□□□□□ -1.95
CHD1-201ENST00000284049 CD276Q5ZPR3 534 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SARM1Q6SZW1 724 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 NBPF5PQ86XG9 351 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 PPP1R3BQ86XI6 285 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 MFN1Q8IWA4 741 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 REPS2Q8NFH8 660 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 CYP2W1Q8TAV3 490 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 KCNE4Q8WWG9 221 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SYAP1Q96A49 352 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 PEX11GQ96HA9 241 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ITPAQ9BY32 194 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PLSCR4Q9NRQ2 329 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 BABAM1Q9NWV8 329 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 RAB21Q9UL25 225 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SESN1Q9Y6P5 492 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 RAB3GAP2Q9H2M9 1393 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 CTDSP2O14595 271 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ADCY6O43306 1168 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 USP2O75604 605 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 HMGCRP04035 888 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 MPOP05164 745 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 EIF2S1P05198 315 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 CTSSP25774 331 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 TFCP2Q12800 502 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ALKBH1Q13686 389 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 SMU1Q2TAY7 513 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 AP5B1Q2VPB7 878 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 KRBOX4Q5JUW0 171 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 C11orf88Q6PI97 169 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 COL23A1Q86Y22 540 aaPredicted RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 SLC4A11Q8NBS3 891 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 MDM1Q8TC05 714 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 C1orf43Q9BWL3 253 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 PDE7BQ9NP56 450 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 NFU1Q9UMS0 254 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 SNX6Q9UNH7 406 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 R3HDM2Q9Y2K5 976 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 PTRH2Q9Y3E5 179 aaKnown RBP2.9□□□□□ -1.95
CHD1-201ENST00000284049 MON2Q7Z3U7 1717 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 NINLQ9Y2I6 1382 aa2.9□□□□□ -1.95
CHD1-201ENST00000284049 ARHGAP10A1A4S6 786 aa2.89□□□□□ -1.95
CHD1-201ENST00000284049 SH2D7A6NKC9 451 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms