RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 C8orf74Q6P047 294 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CHRDL2Q6WN34 429 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 B4GALNT4Q76KP1 1039 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 BEND5Q7L4P6 421 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ELMOD1Q8N336 334 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 PSMG2Q969U7 264 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 MARCH2Q9P0N8 246 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 SAE1Q9UBE0 346 aaPredicted RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 MAFFQ9ULX9 164 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 IRAK3Q9Y616 596 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 C2orf78A6NCI8 922 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ZNF840PA6NDX5 716 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 FAM72CH0Y354 149 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 I6L893 689 aaPredicted RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 DAPK3O43293 454 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ZMYND10O75800 440 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 IRF1P10914 325 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 GOT1P17174 413 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 PSEN1P49768 467 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CYP4F8P98187 520 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 PDK2Q15119 407 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ANKRD20A8PQ5CZ79 823 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 FAM72AQ5TYM5 149 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 FAM72DQ6L9T8 149 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 FAM72BQ86X60 149 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 MMGT1Q8N4V1 131 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 NETO2Q8NC67 525 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 PDZD8Q8NEN9 1154 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 MAIP1Q8WWC4 291 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 PGAP3Q96FM1 320 aaPredicted RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 SERPINB11Q96P15 392 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 TLE6Q9H808 572 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 OLA1Q9NTK5 396 aaKnown RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 HCFC1R1Q9NWW0 138 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 EEF2KO00418 725 aaKnown RBP11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CTIFO43310 598 aaKnown RBP11.8□□□□□ -0.52
XRCC4-201ENST00000282268 COCHO43405 550 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 PHF2O75151 1096 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 MAP3K6O95382 1288 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 IGLV3-25P01717 112 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 ZDHHC11BP0C7U3 371 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 AMPD1P23109 780 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 IL4RP24394 825 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 GABRR2P28476 465 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CCR1P32246 355 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
XRCC4-201ENST00000282268 ARL4AP40617 200 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 NRIP1P48552 1158 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 PPP2R5EQ16537 467 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC70Q6NSX1 233 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 MSANTD2Q6P1R3 559 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 TTC27Q6P3X3 843 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 HDAC7Q8WUI4 952 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 LRRN4Q8WUT4 740 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 TIFAQ96CG3 184 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC114Q96M63 670 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CEP295NLQ96MC4 621 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 RNF157Q96PX1 679 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CYP2S1Q96SQ9 504 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 DCLK3Q9C098 648 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 C10orf88Q9H8K7 445 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 MTMR10Q9NXD2 777 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 CWC15Q9P013 229 aaKnown RBP11.8□□□□□ -0.52
XRCC4-201ENST00000282268 UXTQ9UBK9 157 aaPredicted RBP11.8□□□□□ -0.52
XRCC4-201ENST00000282268 AMACRQ9UHK6 382 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 MFHAS1Q9Y4C4 1052 aa11.8□□□□□ -0.52
XRCC4-201ENST00000282268 PLXNA3P51805 1871 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 H3BRJ5 948 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC188H7C350 402 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 APOL1O14791 398 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 RAD51CO43502 376 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 TERF1P54274 439 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 KLF1Q13351 362 aaPredicted RBP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 DPYSL2Q16555 572 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 TXNDC8Q6A555 127 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 RWDD4Q6NW29 188 aaKnown RBP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC105Q8IYK2 499 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 C12orf76Q8N812 135 aaPredicted RBP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 OVCA2Q8WZ82 227 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 TRMT2BQ96GJ1 504 aaKnown RBP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
XRCC4-201ENST00000282268 MYRFLQ96LU7 910 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 GKN1Q9NS71 199 aa11.79□□□□□ -0.52
XRCC4-201ENST00000282268 SMPD4Q9NXE4 827 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms