RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 DDHD2O94830 711 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 LPCAT1Q8NF37 534 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
SMG9-201ENST00000270066 CES2O00748 559 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 IGSF6O95976 241 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 MPP3Q13368 585 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 DEFB115Q30KQ5 88 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 PABPC1LQ4VXU2 614 aaKnown RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 ACTL9Q8TC94 416 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 PAFAH2Q99487 392 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 RBAK-RBAKDNI3L0D1 243 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 EPB42P16452 691 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 SCTRP47872 440 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 DAB2P98082 770 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 DSG4Q86SJ6 1040 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 SENP8Q96LD8 212 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 PGLYRP2Q96PD5 576 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 THTPAQ9BU02 230 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 ABCC13Q9NSE7 274 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 BLOC1S6Q9UL45 172 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 SHOC2Q9UQ13 582 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 ACOT9Q9Y305 439 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 RAD54BQ9Y620 910 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 MAP3K13O43283 966 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 TRIM16O95361 564 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 NPY2RP49146 381 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 NOGQ13253 232 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 KDM7AQ6ZMT4 941 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 ARID3BQ8IVW6 561 aaPredicted RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 PHACTR4Q8IZ21 702 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 DEFB106AQ8N104 65 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 TMEM199Q8N511 208 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 SENP6Q9GZR1 1112 aaPredicted RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 FKTNO75072 461 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 MPOP05164 745 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 TGM3Q08188 693 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 NBPF20Q3BBV1 942 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 CCDC149Q6ZUS6 474 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 DUSP9Q99956 384 aaKnown RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 ZCCHC2Q9C0B9 1178 aaKnown RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 H2AFY2Q9P0M6 372 aaPredicted RBP13.63□□□□□ -0.23
SMG9-201ENST00000270066 SLIT3O75094 1523 aa13.63□□□□□ -0.23
SMG9-201ENST00000270066 CYP2A6P11509 494 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 MLNP12872 115 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 GRIK5Q16478 980 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 SLC22A9Q8IVM8 553 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 BBS7Q8IWZ6 715 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 MAGEB18Q96M61 343 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 GAD1Q99259 594 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 ECSITQ9BQ95 431 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PDGFDQ9GZP0 370 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 ADNPQ9H2P0 1102 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 GPAMQ9HCL2 828 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 MSH3P20585 1137 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 GLRA2P23416 452 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PTENP60484 403 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 LGI2Q8N0V4 545 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 EPS8L3Q8TE67 593 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 HTR3CQ8WXA8 447 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 EME1Q96AY2 570 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 APOL2Q9BQE5 337 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 LRRC4BQ9NT99 713 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 NR2E3Q9Y5X4 410 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 IFRD1O00458 451 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 MEIS2O14770 477 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PCDH8O95206 1070 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 LTFP02788 710 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 HLA-DPA1P20036 260 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 PAX7P23759 505 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 WEE1P30291 646 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 COPAP53621 1224 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 GTF2BQ00403 316 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 CELF6Q96J87 481 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 CDC42EP4Q9H3Q1 356 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 CCDC134Q9H6E4 229 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 DDX28Q9NUL7 540 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 UTP6Q9NYH9 597 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 ZNF229Q9UJW7 825 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 APPL1Q9UKG1 709 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 DYRK3O43781 588 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 TSPAN3O60637 253 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 CCDC130P13994 396 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 ATXN3P54252 364 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 TSEN34Q9BSV6 310 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 NCF1BA6NI72 391 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 NCF1CA8MVU1 366 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 SASH3O75995 380 aa13.62□□□□□ -0.23
SMG9-201ENST00000270066 NCF1P14598 390 aaPredicted RBP13.62□□□□□ -0.23
SMG9-201ENST00000270066 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms