RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 PMLP29590 882 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 POU6F1Q14863 301 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SPDYCQ5MJ68 293 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 RGS9BPQ6ZS82 235 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 FITM2Q8N6M3 262 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 CENPTQ96BT3 561 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SENP8Q96LD8 212 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 FAM237BA0A1B0GVD1 139 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 MT-CO1P00395 513 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SMPD1P17405 629 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 TAC1P20366 129 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 FOXN2P32314 431 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 PSEN2P49810 448 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 NDUFV1P49821 464 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 MTFR1Q15390 333 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 TFAP2DQ7Z6R9 452 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 CTU1Q7Z7A3 348 aaKnown RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 ATPAF2Q8N5M1 289 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 XAB2Q9HCS7 855 aaKnown RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 ZNF112Q9UJU3 913 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 A0A0G2JLL6 359 aaPredicted RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 KRT16P08779 473 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 IRX1P78414 480 aaPredicted RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 MPP2Q14168 576 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 CCDC142Q17RM4 750 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 RNASEH2BQ5TBB1 312 aaKnown RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 PRRT2Q7Z6L0 340 aaPredicted RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 PLD5Q8N7P1 536 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SH3GL3Q99963 347 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
HERC6-201ENST00000264346 TMPRSS4Q9NRS4 437 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 UTRNP46939 3433 aa12.95□□□□□ -0.34
HERC6-201ENST00000264346 PMM2O15305 246 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 TCN1P20061 433 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 PNPLA4P41247 253 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 PRAMEP78395 509 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 MFSD14CQ5VZR4 134 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 STRA8Q7Z7C7 330 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 MAGEB5Q9BZ81 275 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 IARS2Q9NSE4 1012 aaKnown RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 DNAJC16Q9Y2G8 782 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 CCDC22O60826 627 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 SPAG6O75602 509 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 PCSK1P29120 753 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 GPD2P43304 727 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 WDR4P57081 412 aaKnown RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 ART3Q13508 389 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 ITGA9Q13797 1035 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 ITPRIPL1Q6GPH6 555 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 OTOAQ7RTW8 1153 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 OR52K1Q8NGK4 314 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 GABPB2Q8TAK5 448 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 FBXO41Q8TF61 875 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 PTPRN2Q92932 1015 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 ZBED3Q96IU2 234 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 SEPT5Q99719 369 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 SP110Q9HB58 689 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 CDHR5Q9HBB8 845 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 GRID1Q9ULK0 1009 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 AIM2O14862 343 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 GRIA1P42261 906 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 USP4Q13107 963 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 RASA2Q15283 850 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 N4BP2L1Q5TBK1 243 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 SDHAF4Q5VUM1 108 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 ZNF483Q8TF39 744 aaPredicted RBP12.94□□□□□ -0.34
HERC6-201ENST00000264346 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 SLC17A6Q9P2U8 582 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
HERC6-201ENST00000264346 C2CD2LO14523 706 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 SCAMP3O14828 347 aaKnown RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 PAPSS1O43252 624 aaPredicted RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 PTPN1P18031 435 aaKnown RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 CDC42EP1Q00587 391 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 ARHGAP1Q07960 439 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 SIX1Q15475 284 aaPredicted RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 ZNF618Q5T7W0 954 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 MFSD5Q6N075 450 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.34
HERC6-201ENST00000264346 SKA2Q8WVK7 121 aaPredicted RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 NSL1Q96IY1 281 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 KATNAL1Q9BW62 490 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
HERC6-201ENST00000264346 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 C2CD2Q9Y426 696 aa12.93□□□□□ -0.34
HERC6-201ENST00000264346 MEI4A8MW99 385 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms