RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 MYL6P60660 151 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 SH3PXD2AQ5TCZ1 1133 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 SLC9A4Q6AI14 798 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 MPP5Q8N3R9 675 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 CHURC1Q8WUH1 139 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 KLHL25Q9H0H3 589 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 TCF7L2Q9NQB0 619 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 EURLQ9NYK6 297 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 BCAP29Q9UHQ4 241 aa16.4■□□□□ 0.22
PRPF40B-201ENST00000261897 IGLV3-22A0A075B6J6 115 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 FAM149AA5PLN7 773 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ITGAXP20702 1163 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ZBTB49Q6ZSB9 765 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 SPATA6LQ8N4H0 392 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 EXT2Q93063 718 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 PCDHAC1Q9H158 963 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 PIF1Q9H611 641 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 PPCSQ9HAB8 311 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 GPAMQ9HCL2 828 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ERVK-10P10266 1014 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 IL1R2P27930 398 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 MIPP30301 263 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ZBTB8BQ8NAP8 495 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 KYQ8NBH2 561 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 BSNDQ8WZ55 320 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 TRIM17Q9Y577 477 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 DNAJA2O60884 412 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 TGDSO95455 350 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ITGAVP06756 1048 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 NFKBIAP25963 317 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 TRIM16LQ309B1 348 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 AAGABQ6PD74 315 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 POTEAQ6S8J7 498 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 RNF111Q6ZNA4 994 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 ENOSF1Q7L5Y1 443 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 EEPD1Q7L9B9 569 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 KDELC2Q7Z4H8 507 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 PKP2Q99959 881 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 FBXO40Q9UH90 709 aa16.39■□□□□ 0.21
PRPF40B-201ENST00000261897 SPTLC1O15269 473 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 GRIN3BO60391 1043 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 MT-ND1P03886 318 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 KDELR1P24390 212 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 CCR10P46092 362 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 NME3Q13232 169 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PITRM1Q5JRX3 1037 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 RMDN3Q96TC7 470 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 MXRA8Q9BRK3 442 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 MRPS26Q9BYN8 205 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 CCDC90BQ9GZT6 254 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 COG4Q9H9E3 785 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 CAB39LQ9H9S4 337 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 HSFX1Q9UBD0 423 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 ZBTB11O95625 1053 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 RXRGP48443 463 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF699Q32M78 642 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 HABP4Q5JVS0 413 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 EXOC8Q8IYI6 725 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 DDI1Q8WTU0 396 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 GAB3Q8WWW8 586 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PRICKLE1Q96MT3 831 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PTPRHQ9HD43 1115 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PSMD13Q9UNM6 376 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 PENKP01210 267 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 CPA3P15088 417 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 NCCRP1Q6ZVX7 275 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 NAT8LQ8N9F0 302 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 ZNF516Q92618 1163 aa16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-201ENST00000261897 TMEM191CA6NGB0 347 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 GCNT1Q02742 428 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 SCARA3Q6AZY7 606 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 TRIM72Q6ZMU5 477 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 TDRD5Q8NAT2 981 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 NOL11Q9H8H0 719 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 USP18Q9UMW8 372 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 HMGCRP04035 888 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 PHKA2P46019 1235 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 YAP1P46937 504 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 IDH3AP50213 366 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 KLF10Q13118 480 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 UGT2A3Q6UWM9 527 aa16.37■□□□□ 0.21
PRPF40B-201ENST00000261897 UNC5AQ6ZN44 842 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms