RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF77Q15935 545 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 IFI16Q16666 785 aaKnown RBP12.09□□□□□ -0.47
PFDN1-201ENST00000261813 CLEC16AQ2KHT3 1053 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 BTBD8Q5XKL5 378 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 ACAD10Q6JQN1 1059 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 KLHDC10Q6PID8 442 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 MFSD6LQ8IWD5 586 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 ZNF276Q8N554 614 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
PFDN1-201ENST00000261813 IPO4Q8TEX9 1081 aaKnown RBP12.09□□□□□ -0.47
PFDN1-201ENST00000261813 UBE2Q2Q8WVN8 375 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 EDEM1Q92611 657 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 SPTLC3Q9NUV7 552 aa12.09□□□□□ -0.47
PFDN1-201ENST00000261813 ANKRD62A6NC57 917 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 LEFTY2O00292 366 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
PFDN1-201ENST00000261813 LTFP02788 710 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 RALAP11233 206 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 TCF3P15923 654 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 PSMC3P17980 439 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 MMP8P22894 467 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 ATP5C1P36542 298 aaKnown RBP12.08□□□□□ -0.48
PFDN1-201ENST00000261813 NSFP46459 744 aaKnown RBP12.08□□□□□ -0.48
PFDN1-201ENST00000261813 CENPCQ03188 943 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 FCHO2Q0JRZ9 810 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 C10orf120Q5SQS8 335 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 OR6B2Q6IFH4 312 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 ERICH1Q86X53 443 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 XYLT1Q86Y38 959 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 BPIFB1Q8TDL5 484 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 SH3RF2Q8TEC5 729 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 WBP2Q969T9 261 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 E2F7Q96AV8 911 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 NACA2Q9H009 215 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 PRDM9Q9NQV7 894 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 GKN1Q9NS71 199 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 TAS2R14Q9NYV8 317 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 RASAL2Q9UJF2 1139 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 DUSP12Q9UNI6 340 aa12.08□□□□□ -0.48
PFDN1-201ENST00000261813 HELZP42694 1942 aaKnown RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 PJA2O43164 708 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 FTLP02792 175 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 TMEM253P0C7T8 217 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 NDUFV2P19404 249 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 GPC5P78333 572 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 SLC6A3Q01959 620 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 EFEMP1Q12805 493 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 PTP4A2Q12974 167 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 ACRBPQ8NEB7 543 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 TTC16Q8NEE8 873 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 FAM149B1Q96BN6 582 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 C18orf8Q96DM3 657 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 CDK5RAP1Q96SZ6 601 aaKnown RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 C11orf70Q9BRQ4 267 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 TRMT61BQ9BVS5 477 aaKnown RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 KLF16Q9BXK1 252 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 SYNCQ9H7C4 482 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 ASNSD1Q9NWL6 643 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 MYO1AQ9UBC5 1043 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 DNMT3LQ9UJW3 386 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 NAALADL1Q9UQQ1 740 aa12.07□□□□□ -0.48
PFDN1-201ENST00000261813 KIF26AQ9ULI4 1882 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-201ENST00000261813 A0A0A6YYK5 440 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-201ENST00000261813 ARNTLO00327 626 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 KIF5CO60282 957 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 GREM1O60565 184 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 GRAP2O75791 330 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 DXOO77932 396 aaKnown RBP12.06□□□□□ -0.48
PFDN1-201ENST00000261813 CALB1P05937 261 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 SRFP11831 508 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 GDI1P31150 447 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 MSANTD2Q6P1R3 559 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 MON1BQ7L1V2 547 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 BEND5Q7L4P6 421 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 SLC26A9Q7LBE3 791 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 DNAAF5Q86Y56 855 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 PHF13Q86YI8 300 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-201ENST00000261813 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 ZDHHC17Q8IUH5 632 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 RNF139Q8WU17 664 aa12.06□□□□□ -0.48
PFDN1-201ENST00000261813 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms