RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 HPDLQ96IR7 371 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 CAPNS2Q96L46 248 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 WWP1Q9H0M0 922 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 CDT1Q9H211 546 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 FLRT1Q9NZU1 646 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 LRCH1Q9Y2L9 728 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 TTLL3Q9Y4R7 772 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 C6orf222P0C671 652 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 NCF2P19878 526 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 GPD2P43304 727 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 CACNA2D1P54289 1103 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 IRX1P78414 480 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 MRPS5P82675 430 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 PDE1BQ01064 536 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 IZUMO2Q6UXV1 221 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 USP29Q9HBJ7 922 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 ETNK2Q9NVF9 386 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 PACSIN3Q9UKS6 424 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 C2CD2Q9Y426 696 aa14.97□□□□□ -0.01
SFSWAP-201ENST00000261674 METTL18O95568 372 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 DHRS4L1P0CG22 281 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 CDH5P33151 784 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 ZNF143P52747 638 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 GBE1Q04446 702 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 TRIM32Q13049 653 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PEX6Q13608 980 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 CFAP157Q5JU67 520 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 CAND1Q86VP6 1230 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 CHSY1Q86X52 802 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 TMPRSS6Q8IU80 811 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 KBTBD2Q8IY47 623 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PYDC1Q8WXC3 89 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PPP1R36Q96LQ0 422 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 LHX5Q9H2C1 402 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 DYNC1LI2O43237 492 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PDE5AO76074 875 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 APOEP02649 317 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 TFE3P19532 575 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 SDC4P31431 198 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 MXD4Q14582 209 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 SLC30A9Q6PML9 568 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PLEKHH3Q7Z736 793 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 GSTCDQ8NEC7 633 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PCDH19Q8TAB3 1148 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 ZCWPW1Q9H0M4 648 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 PAPOLBQ9NRJ5 636 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 DNAJC16Q9Y2G8 782 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 MCM3APO60318 1980 aa14.96□□□□□ -0.01
SFSWAP-201ENST00000261674 ZMPSTE24O75844 475 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 PHKA2P46019 1235 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 SARNPP82979 210 aaKnown RBP14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 PPP2R5DQ14738 602 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 DENND5BQ6ZUT9 1274 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC26A7Q8TE54 656 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 SH3TC2Q8TF17 1288 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 FNIP1Q8TF40 1166 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 ACSS2Q9NR19 701 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 FETUBQ9UGM5 382 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 GABRQQ9UN88 632 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 AKT3Q9Y243 479 aa14.96□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC15A5A6NIM6 579 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 FAM155AB1AL88 458 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 TXNDC9O14530 226 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 RFPL1O75677 317 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 IQCF3P0C7M6 154 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ELNP15502 786 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 BEX3Q00994 111 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 HSF5Q4G112 596 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ULK2Q8IYT8 1036 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 PHC3Q8NDX5 983 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ANKRD27Q96NW4 1050 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 SNRNP25Q9BV90 132 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 MROH8Q9H579 483 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 POPDC2Q9HBU9 364 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 STX18Q9P2W9 335 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ACKR2O00590 384 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 LIN7AO14910 233 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ITM2AO43736 263 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 TGDSO95455 350 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ABCG1P45844 678 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 TMEM62Q0P6H9 643 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 FASTKD1Q53R41 847 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 RASIP1Q5U651 963 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 AFG1LQ8WV93 481 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 ZNF184Q99676 751 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 NDE1Q9NXR1 346 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 SLC7A8Q9UHI5 535 aa14.95□□□□□ -0.02
SFSWAP-201ENST00000261674 A0A087WZ62 844 aa14.94□□□□□ -0.02
SFSWAP-201ENST00000261674 WDR27A2RRH5 827 aa14.94□□□□□ -0.02
SFSWAP-201ENST00000261674 CHADO15335 359 aa14.94□□□□□ -0.02
SFSWAP-201ENST00000261674 ADCY6O43306 1168 aa14.94□□□□□ -0.02
SFSWAP-201ENST00000261674 SORBS2O94875 1100 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms