RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PDK2Q15119 407 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 MAP4K3Q8IVH8 894 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 DOLKQ9UPQ8 538 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 WASHC5Q12768 1159 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ITGADQ13349 1161 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 FAM83EQ2M2I3 478 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 FUT11Q495W5 492 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 DCAF6Q58WW2 860 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 IARS2Q9NSE4 1012 aaKnown RBP16.66■□□□□ 0.26
SREBF1-201ENST00000261646 PNPOQ9NVS9 261 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 ARHGEF38Q9NXL2 777 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 CCDC167Q9P0B6 97 aa16.66■□□□□ 0.26
SREBF1-201ENST00000261646 TPP1O14773 563 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 TIMM44O43615 452 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 TBC1D4O60343 1298 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 MGAT1P26572 445 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 CAPRIN1Q14444 709 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 TAF12Q16514 161 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 OTUD3Q5T2D3 398 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 LRRC38Q5VT99 294 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 CCDC81Q6ZN84 652 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 LRRC40Q9H9A6 602 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 PLGRKTQ9HBL7 147 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 GPAMQ9HCL2 828 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 MRGBPQ9NV56 204 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 SCHIP1Q9P0W5 487 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 CCDC189A1A4V9 331 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 TRMUO75648 421 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 CHRM1P11229 460 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 NFKBIAP25963 317 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 HADHBP55084 474 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 GALNTL6Q49A17 601 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 COLGALT1Q8NBJ5 622 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 ZC3H15Q8WU90 426 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 GLIS2Q9BZE0 524 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 MYH2Q9UKX2 1941 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 UBA6A0AVT1 1052 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 DFFAO00273 331 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 HUS1O60921 280 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 CLK1P49759 484 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 ABCE1P61221 599 aaKnown RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 ANKRD22Q5VYY1 191 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 ADGRD1Q6QNK2 874 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 BBS12Q6ZW61 710 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 DCUN1D1Q96GG9 259 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 MARK4Q96L34 752 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 C6orf203Q9P0P8 240 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-201ENST00000261646 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 LNPEPQ9UIQ6 1025 aa16.65■□□□□ 0.26
SREBF1-201ENST00000261646 OGTO15294 1046 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PIGNO95427 931 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 TGDSO95455 350 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 MYL4P12829 197 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 KCNA2P16389 499 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 CHRNB2P17787 502 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 CDH8P55286 799 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 GTF2BQ00403 316 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 RALGPS1Q5JS13 557 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 AMIGO2Q86SJ2 522 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 ZNF554Q86TJ5 538 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 TDRPQ86YL5 185 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 FAM151AQ8WW52 585 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 SEC14L1Q92503 715 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 BRD8Q9H0E9 1235 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 ADAM7Q9H2U9 754 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 DMTF1Q9Y222 760 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 CASZ1Q86V15 1759 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 SNX2O60749 519 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 ITGA2BP08514 1039 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 NAGLUP54802 743 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 RBP5P82980 135 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PRKAA1Q13131 559 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 FNBP1LQ5T0N5 605 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 IPMKQ8NFU5 416 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 HPDLQ96IR7 371 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PSMD13Q9UNM6 376 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 FZD1Q9UP38 647 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PLLPQ9Y342 182 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 TOPAZ1Q8N9V7 1692 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 TCEA3O75764 348 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 RARBP10826 455 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PLIN5Q00G26 463 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-201ENST00000261646 MMRN1Q13201 1228 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 ARCQ7LC44 396 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 FAM131BQ86XD5 332 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-201ENST00000261646 ZFAND2BQ8WV99 257 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 CPT1BQ92523 772 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 MBOAT7Q96N66 472 aa16.64■□□□□ 0.25
SREBF1-201ENST00000261646 AGO4Q9HCK5 861 aaKnown RBP16.64■□□□□ 0.25
SREBF1-201ENST00000261646 SARS2Q9NP81 518 aaKnown RBP16.64■□□□□ 0.25
SREBF1-201ENST00000261646 TSR3Q9UJK0 312 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms