RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ADCYAP1R1P41586 468 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 GRM5P41594 1212 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 CBLBQ13191 982 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 EFTUD2Q15029 972 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 GRIK4Q16099 956 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ZNF394Q53GI3 561 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 C2CD6Q53TS8 623 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 TFDP3Q5H9I0 405 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ZFYVE27Q5T4F4 411 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 NAT8LQ8N9F0 302 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 OR6J1Q8NGC5 347 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC35B2Q8TB61 432 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 TFAP2BQ92481 460 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 JADE3Q92613 823 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 LENG1Q96BZ8 264 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 BTBD9Q96Q07 612 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 PREBQ9HCU5 417 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 PPM1HQ9ULR3 514 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 TTC36A6NLP5 189 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 TSPAN1O60635 241 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 COQ9O75208 318 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SPAG6O75602 509 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ITGA2BP08514 1039 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 IQCF3P0C7M6 154 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 FAM200BP0CF97 657 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 KRT3P12035 628 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 KRT10P13645 584 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SNX16P57768 344 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 RPL7AP62424 266 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 INCA1Q0VD86 236 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC10A6Q3KNW5 377 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 LLGL2Q6P1M3 1020 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 MFSD7Q6UXD7 560 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 WDTC1Q8N5D0 677 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 FBXO36Q8NEA4 188 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC44A1Q8WWI5 657 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 TTC17Q96AE7 1141 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 HPDLQ96IR7 371 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 FAM111AQ96PZ2 611 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 LBHD1Q9BQE6 289 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SIKE1Q9BRV8 207 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 hCG_1818297A0A087WSY0 165 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 GOLGA8RI6L899 631 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SGK1O00141 431 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 CCNT2O60583 730 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SERPINA6P08185 405 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ZNF286BP0CG31 522 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 DESP17661 470 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 VCLP18206 1134 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 AOC1P19801 751 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 PSMA2P25787 234 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 AXLP30530 894 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 GABRB2P47870 512 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 CPA2P48052 419 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 CHN2P52757 468 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 PTK7Q13308 1070 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 HIC1Q14526 733 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 EFHC1Q5JVL4 640 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 FNBP1LQ5T0N5 605 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ARMC3Q5W041 872 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 KAZNQ674X7 775 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 KLC3Q6P597 504 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 RFX8Q6ZV50 586 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 RAPH1Q70E73 1250 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 C2orf69Q8N8R5 385 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 CXorf38Q8TB03 319 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 CPT1BQ92523 772 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SERAC1Q96JX3 654 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 PLEKHG4BQ96PX9 1271 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 C12orf65Q9H3J6 166 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 GBA2Q9HCG7 927 aaPredicted RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 ALG13Q9NP73 1137 aaKnown RBP11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 SOX13Q9UN79 622 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 IKBKGQ9Y6K9 419 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 RALGAPA2Q2PPJ7 1873 aa11.17□□□□□ -0.62
CHRNA1-201ENST00000261007 NRCAMQ92823 1304 aa11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 A0A088AWK7 358 aa11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 CASQ2O14958 399 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 VTNP04004 478 aa11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 SMPD1P17405 629 aa11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 ATF7P17544 494 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 SSTR3P32745 418 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 GJC1P36383 396 aa11.16□□□□□ -0.62
CHRNA1-201ENST00000261007 GRIA2P42262 883 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms