RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TRIM72Q6ZMU5 477 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PPP4R3CPQ6ZMV5 832 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 SLC16A12Q6ZSM3 486 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ANKLE2Q86XL3 938 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 HPS6Q86YV9 775 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CRYBG2Q8N1P7 616 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 BSNDQ8WZ55 320 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CCDC120Q96HB5 630 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PPP1R2P1Q96PQ5 205 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 TDRD1Q9BXT4 1180 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 NAPBQ9H115 298 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 KCNK13Q9HB14 408 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 SEMA3GQ9NS98 782 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 BMP2KQ9NSY1 1161 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 LRRC4BQ9NT99 713 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 VAV3Q9UKW4 847 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 TRBV23OR9-2A0A075B6M9 112 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 FPGTO14772 594 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 TSPAN4O14817 238 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 THAP12O43422 761 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 AP1G1O43747 822 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CCNT2O60583 730 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CDC123O75794 336 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 VNN1O95497 513 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 STAU1O95793 577 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 OAS1P00973 400 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 KRT3P12035 628 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 SLC9A1P19634 815 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 IFNAR2P48551 515 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 SPAG1Q07617 926 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 STX3Q13277 289 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 VEPH1Q14D04 833 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 LTB4RQ15722 352 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 GRIK4Q16099 956 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 MTHFSDQ2M296 383 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 AGBL2Q5U5Z8 902 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 AGAP7PQ5VUJ5 663 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 MZT2BQ6NZ67 158 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 FRA10AC1Q70Z53 315 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF410Q86VK4 478 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 FBXO11Q86XK2 927 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PHTF2Q8N3S3 785 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 CAMKK1Q8N5S9 505 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 METTL25Q8N6Q8 603 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 FSIP1Q8NA03 581 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 MINDY2Q8NBR6 621 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 OR52K1Q8NGK4 314 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 GLG1Q92896 1179 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 WNK4Q96J92 1243 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF560Q96MR9 790 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 LSM14BQ9BX40 385 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 STN1Q9H668 368 aaKnown RBP7.97□□□□□ -1.13
GPNMB-201ENST00000258733 DNAJB4Q9UDY4 337 aa7.97□□□□□ -1.13
GPNMB-201ENST00000258733 PPEF1O14829 653 aaPredicted RBP7.96□□□□□ -1.13
GPNMB-201ENST00000258733 TREHO43280 583 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 PLOD3O60568 738 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 APOC1P02654 83 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 TP53P04637 393 aaPredicted RBP7.96□□□□□ -1.13
GPNMB-201ENST00000258733 RPS17P08708 135 aaKnown RBP7.96□□□□□ -1.13
GPNMB-201ENST00000258733 PPP2R5EQ16537 467 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 C6orf10Q5SRN2 563 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 ATF7IP2Q5U623 682 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 LYPD8Q6UX82 237 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 UNC5AQ6ZN44 842 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 TAGAPQ8N103 731 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 MCOLN3Q8TDD5 553 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 TSPEARQ8WU66 669 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 AIDAQ96BJ3 306 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 C7orf26Q96N11 449 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF641Q96N77 438 aaPredicted RBP7.96□□□□□ -1.13
GPNMB-201ENST00000258733 LRRC1Q9BTT6 524 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 SLC2A11Q9BYW1 496 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 OR2B2Q9GZK3 357 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 OSBPL2Q9H1P3 480 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 HPF1Q9NWY4 346 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 EXTL2Q9UBQ6 330 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 RSL24D1Q9UHA3 163 aaKnown RBP7.96□□□□□ -1.13
GPNMB-201ENST00000258733 MAU2Q9Y6X3 613 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 WNK3Q9BYP7 1800 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 ADCY9O60503 1353 aa7.96□□□□□ -1.13
GPNMB-201ENST00000258733 LOC390937A0A1W2PQ73 354 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PTPDC1A2A3K4 754 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PDE2AO00408 941 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 AREL1O15033 823 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 FZD6O60353 706 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 KRT36O76013 467 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 POLBP06746 335 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 CLEC2LP0C7M8 214 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 RAG1P15918 1043 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 TIMP2P16035 220 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PLCG1P19174 1290 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 ITIH1P19827 911 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 NCF2P19878 526 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-201ENST00000258733 PSMA2P25787 234 aa7.96□□□□□ -1.14
GPNMB-201ENST00000258733 GJB2P29033 226 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms