RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 COLGALT2Q8IYK4 626 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 TDRD5Q8NAT2 981 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 TBC1D15Q8TC07 691 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 LY9Q9HBG7 655 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 GLS2Q9UI32 602 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PHTF1Q9UMS5 762 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RIMBP2O15034 1052 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A9O60656 530 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A6P19224 532 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A1P22309 533 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A4P22310 534 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A3P35503 534 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A5P35504 534 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 POLD2P49005 469 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF200P98182 395 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 USPL1Q5W0Q7 1092 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM91A1Q658Y4 838 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 DCUN1D2Q6PH85 259 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 BHLHB9Q6PI77 547 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 POTEHQ6S545 545 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 GALNT13Q8IUC8 556 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SYTL1Q8IYJ3 562 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 METTL4Q8N3J2 472 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 BTBD9Q96Q07 612 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 TEKT3Q9BXF9 490 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 FRMD8Q9BZ67 464 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A7Q9HAW7 530 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A10Q9HAW8 530 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 UGT1A8Q9HAW9 530 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 WASH6PQ9NQA3 447 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 AGPAT3Q9NRZ7 376 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 KLHL3Q9UH77 587 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 KNDC1Q76NI1 1749 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 HEATR9A2RTY3 570 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 A8MX80 341 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 F8W031 263 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 CALML3P27482 149 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 GRIK1P39086 918 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNJ5P48544 419 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RPL26P61254 145 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 RPS6P62753 249 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PLOD1Q02809 727 aaPredicted RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 KCNMA1Q12791 1236 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 METTL3Q86U44 580 aaKnown RBP6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF677Q86XU0 584 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 SIRT2Q8IXJ6 389 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 NTN4Q9HB63 628 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PNPLA3Q9NST1 481 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDH10Q9P2E7 1040 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 WDR19Q8NEZ3 1342 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 C3P01024 1663 aa6.93□□□□□ -1.3
PDGFRA-201ENST00000257290 IFNA7P01567 189 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 TFPTP0C1Z6 253 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CCND2P30279 289 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ASMTP46597 345 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 RXRGP48443 463 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ENTPD1P49961 510 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PTPN12Q05209 780 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MTF1Q14872 753 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 KLHL26Q53HC5 615 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 OTUD7BQ6GQQ9 843 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CALML4Q96GE6 196 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MOGAT1Q96PD6 335 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GCOM2Q9BZD3 368 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GREM2Q9H772 168 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GRIN2DO15399 1336 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 PVALEFA0A1B0GWK0 134 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 E5RI56 91 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 FOXD2O60548 495 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SERPINB7O75635 380 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 FTCDO95954 541 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ABCB4P21439 1286 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 MUTP22033 750 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 NR4A1P22736 598 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 S100A2P29034 98 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 WEE1P30291 646 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 CHRNDQ07001 517 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 STILQ15468 1287 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 DENND5AQ6IQ26 1287 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 DPP8Q6V1X1 898 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 DNAJB7Q7Z6W7 309 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ZNF555Q8NEP9 628 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ANGPTL6Q8NI99 470 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 EDC3Q96F86 508 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 RMND5AQ9H871 391 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 C6orf50Q9HD87 102 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ARHGEF3Q9NR81 526 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 BAG5Q9UL15 447 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 RAD54BQ9Y620 910 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 SOS2Q07890 1332 aaPredicted RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 FAM196BA6NMK8 535 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 NPM3O75607 178 aaKnown RBP6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 ASNSP08243 561 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 G0S2P27469 103 aa6.92□□□□□ -1.3
PDGFRA-201ENST00000257290 GPR107Q5VW38 600 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms