RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 HEATR6Q6AI08 1181 aaKnown RBP26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 RNF139Q8WU17 664 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 PCED1BQ96HM7 432 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 TTLL3Q9Y4R7 772 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 SYNJ2BP-COX16A0A087WUM0 186 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 HACD1B0YJ81 288 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 AP1G2O75843 785 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 ZWINTO95229 277 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 C1QAP02745 245 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 VAV1P15498 845 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 GBP2P32456 591 aaPredicted RBP26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 MAGEA3P43357 314 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 RABGGTBP53611 331 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 PDK4Q16654 411 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 ZNF534Q76KX8 674 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 CNPY4Q8N129 248 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 TFB1MQ8WVM0 346 aaKnown RBP26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 COX16Q9P0S2 106 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 PRKAG3Q9UGI9 489 aa26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.06■■□□□ 1.76
TMEM55B-201ENST00000250489 CASTOR2A6NHX0 329 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 H3BRJ5 948 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 SEPT4O43236 478 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 CA12O43570 354 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 MFSD11O43934 449 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 ADAMTS4O75173 837 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 FYNP06241 537 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 RPL9P32969 192 aaKnown RBP26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 DAOAP59103 153 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 DEUP1Q05D60 604 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 TRIM32Q13049 653 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 ZMIZ2Q8NF64 920 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 HTR3CQ8WXA8 447 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 GRAMD1AQ96CP6 724 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 LRRC39Q96DD0 335 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 PIGVQ9NUD9 493 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 ABCF3Q9NUQ8 709 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 ZC3H7BQ9UGR2 993 aaKnown RBP26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 CDH9Q9ULB4 789 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 ARL2BPQ9Y2Y0 163 aa26.05■■□□□ 1.76
TMEM55B-201ENST00000250489 RPLP2P05387 115 aaKnown RBP26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 FLT3LGP49771 235 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 NME3Q13232 169 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PTK7Q13308 1070 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 FBXW10Q5XX13 1052 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 BZW1Q7L1Q6 419 aaKnown RBP26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PRPF39Q86UA1 669 aaKnown RBP26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 ALKBH8Q96BT7 664 aaKnown RBP26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PAAF1Q9BRP4 392 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PITPNM3Q9BZ71 974 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PLAC1Q9HBJ0 212 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 TMEM30AQ9NV96 361 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 PTCH2Q9Y6C5 1203 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 IQANK1A0A1B0GTG1 560 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 CACNA2D1P54289 1103 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 SEMA5AQ13591 1074 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 UPP1Q16831 310 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 HHATQ5VTY9 493 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 LVRNQ6Q4G3 990 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 GPRIN1Q7Z2K8 1008 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 BANPQ8N9N5 519 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 RNF169Q8NCN4 708 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 KCNK16Q96T55 309 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 IKBKGQ9Y6K9 419 aa26.04■■□□□ 1.76
TMEM55B-201ENST00000250489 YJEFN3A6XGL0 299 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 E7ENQ6 273 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 INHBAP08476 426 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 CD52P31358 61 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 THPOP40225 353 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 DNAJC3Q13217 504 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 TIGD5Q53EQ6 642 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 RAB41Q5JT25 222 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 FAM47EQ6ZV65 393 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 SPOCK2Q92563 424 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 ZIC5Q96T25 663 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 PLCD4Q9BRC7 762 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 CNGB3Q9NQW8 809 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 PADI3Q9ULW8 664 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 SLC12A4Q9UP95 1085 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 NR2E3Q9Y5X4 410 aa26.03■■□□□ 1.76
TMEM55B-201ENST00000250489 A0A0A0MRY4 1105 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 MGEA5O60502 916 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 GSTA1P08263 222 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 TM4SF4P48230 202 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 FAAP100Q0VG06 881 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 SPATA13Q96N96 652 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 LGMNQ99538 433 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 SF3B1O75533 1304 aaKnown RBP eCLIP26.02■■□□□ 1.764e-7■■■■■ 133.7
TMEM55B-201ENST00000250489 C9IYK1 514 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 ZNF623O75123 536 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 MT-ND3P03897 115 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 ASGR1P07306 291 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 PRKD1Q15139 912 aaPredicted RBP26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 ANKRD20A2Q5SQ80 823 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 ANKRD20A1Q5TYW2 823 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 ANKRD20A3Q5VUR7 823 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 SLC7A14Q8TBB6 771 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 SIGLEC10Q96LC7 697 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 SLC9A7Q96T83 725 aa26.02■■□□□ 1.76
TMEM55B-201ENST00000250489 KLF6Q99612 283 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms