RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TNFRSF4P43489 277 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 GABRB2P47870 512 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 MRPS21P82921 87 aaKnown RBP25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 CDR2Q01850 454 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC6A3Q01959 620 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 PTPN20Q4JDL3 420 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 TRIM72Q6ZMU5 477 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 LUZP1Q86V48 1076 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 ERICH1Q86X53 443 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 NAT16Q8N8M0 369 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 EZH1Q92800 747 aaPredicted RBP25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 ACDQ96AP0 544 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 SEMA4AQ9H3S1 761 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 FAM86C1Q9NVL1 165 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 TJP2Q9UDY2 1190 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 NOCTQ9UK39 431 aaKnown RBP25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 MYO6Q9UM54 1294 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 K7EQS6 105 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 ERBB2P04626 1255 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 MMEP08473 750 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 SCNN1AP37088 669 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 SATB1Q01826 763 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 HSF5Q4G112 596 aaPredicted RBP25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 GRAMD4Q6IC98 578 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 OLFML1Q6UWY5 402 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 FAM183BPQ6ZVS7 135 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 ALYREFQ86V81 257 aaKnown RBP25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 ZNF397Q8NF99 534 aaPredicted RBP25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 NELL1Q92832 810 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 C18orf8Q96DM3 657 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 ZSCAN32Q9NX65 697 aa25.36■■□□□ 1.65
SDF2L1-201ENST00000248958 PENKP01210 267 aaPredicted RBP25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC11A2P49281 568 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 ADGRF1Q5T601 910 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 SYPL2Q5VXT5 272 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC26A9Q7LBE3 791 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 PHTF2Q8N3S3 785 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 RPLP0P6Q8NHW5 317 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 KCNV2Q8TDN2 545 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC2A13Q96QE2 648 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 DDX50Q9BQ39 737 aaKnown RBP25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 DNAJC17Q9NVM6 304 aaKnown RBP25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 PCDHGA2Q9Y5H1 932 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 ATG2BQ96BY7 2078 aa25.35■■□□□ 1.65
SDF2L1-201ENST00000248958 FERP16591 822 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 HOXA6P31267 233 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 GBP1P32455 592 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 NOMO3P69849 1222 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 CDK17Q00537 523 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 KDSRQ06136 332 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 NR1I3Q14994 352 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 MPPE1Q53F39 396 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 DCAF6Q58WW2 860 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 FYB2Q5VWT5 728 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 TAC4Q86UU9 113 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 DEFB106AQ8N104 65 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 TERB1Q8NA31 727 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 USP33Q8TEY7 942 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC39A13Q96H72 371 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 NAP1L5Q96NT1 182 aaPredicted RBP25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 TMEM51Q9NW97 253 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 RRN3Q9NYV6 651 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 FBXO10Q9UK96 956 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC8A2Q9UPR5 921 aa25.34■■□□□ 1.65
SDF2L1-201ENST00000248958 TBC1D3BA6NDS4 549 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 TRUB2O95900 331 aaKnown RBP25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 IGLV3-25P01717 112 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 CYP1A1P04798 512 aaPredicted RBP25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 TDGF1P13385 188 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 DGKGP49619 791 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 FANCCQ00597 558 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 FMO1Q01740 532 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 TSSK4Q6SA08 328 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 SYT13Q7L8C5 426 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 ZBTB44Q8NCP5 570 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 DDI1Q8WTU0 396 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 ATRIPQ8WXE1 791 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 PIWIL1Q96J94 861 aaKnown RBP25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 FCRL2Q96LA5 508 aaPredicted RBP25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 SLC2A11Q9BYW1 496 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 EDEM3Q9BZQ6 932 aa25.33■■□□□ 1.65
SDF2L1-201ENST00000248958 K7ESF4 209 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 IRAK2O43187 625 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 ACSL4O60488 711 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 DAB1O75553 588 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 APOEP02649 317 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 NOS2P35228 1153 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 MTA1Q13330 715 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 TAF5Q15542 800 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 NFKBIBQ15653 356 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 PKN3Q6P5Z2 889 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 CAMKK1Q8N5S9 505 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 SLC20A1Q8WUM9 679 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 STARD13Q9Y3M8 1113 aa25.32■■□□□ 1.64
SDF2L1-201ENST00000248958 CACNA1HO95180 2353 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 SLC2A3P11169 496 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 CHRNB2P17787 502 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 SEC13P55735 322 aa25.31■■□□□ 1.64
SDF2L1-201ENST00000248958 UBASH3AP57075 661 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms