RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 CBWD3Q5JTY5 395 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CBWD5Q5RIA9 395 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SNX30Q5VWJ9 437 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 RIOX2Q8IUF8 465 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SYTL1Q8IYJ3 562 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 UBE2E3Q969T4 207 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZNF558Q96NG5 402 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 OMDQ99983 421 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 C2orf49Q9BVC5 232 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 THAP2Q9H0W7 228 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SETD4Q9NVD3 440 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 E7ENQ6 273 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 NDUFS2O75306 463 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PROSCO94903 275 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CCND1P24385 295 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CXCR2P25025 360 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 THOP1P52888 689 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 GRB10Q13322 594 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CYTH1Q15438 398 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 APLFQ8IW19 511 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 RNF208Q9H0X6 261 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ALG13Q9NP73 1137 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 NDUFA13Q9P0J0 144 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TRAV19A0A0A6YYK7 116 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 PLSCR1O15162 318 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 DDNO94850 711 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 GYPCP04921 128 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NUP62P37198 522 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 RFX5P48382 616 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 STRA8Q7Z7C7 330 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NT5DC3Q86UY8 548 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 RMND5BQ96G75 393 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 DNAJC1Q96KC8 554 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 CCT8L2Q96SF2 557 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 GAKO14976 1311 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 KIF20BQ96Q89 1820 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SLIT1O75093 1534 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 FAM220BPB1ANY3 271 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SLC37A4O43826 429 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 MED24O75448 989 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CCDC159P0C7I6 412 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SERPINA4P29622 427 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CCT8P50990 548 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 VSNL1P62760 191 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 FGD2Q7Z6J4 655 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CLYBLQ8N0X4 340 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ACTR8Q9H981 624 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NT5MQ9NPB1 228 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 PPP1R3GB7ZBB8 358 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 C1QTNF3-AMACRE9PGA6 284 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SGTAO43765 313 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 CYP1A1P04798 512 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 PCNAP12004 261 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NAB1Q13506 487 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ZNF614Q8N883 585 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 COLGALT1Q8NBJ5 622 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SIKE1Q9BRV8 207 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ASCC2Q9H1I8 757 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 COMMD8Q9NX08 183 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 HPS5Q9UPZ3 1129 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 KLHL20Q9Y2M5 609 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 TRIM49D1C9J1S8 452 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 MYL6P60660 151 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 LUZP2Q86TE4 346 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 LRRC49Q8IUZ0 686 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 DPP10Q8N608 796 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 MOSPD2Q8NHP6 518 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 TBC1D23Q9NUY8 699 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ZNF510Q9Y2H8 683 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 RNF103O00237 685 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 FGF10O15520 208 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 POMCP01189 267 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 JCHAINP01591 159 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SKIV2L2P42285 1042 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 CLK3P49761 638 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 RAD23AP54725 363 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SNRPD1P62314 119 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 DDX39BQ13838 428 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 CCDC142Q17RM4 750 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 BHMTQ93088 406 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 C18orf25Q96B23 403 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 TRIM51Q9BSJ1 452 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 NMRAL1Q9HBL8 299 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 PCDH9Q9HC56 1237 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 PCDHA3Q9Y5H8 950 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ZSCAN5CA6NGD5 496 aaPredicted RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 SAC3D1A6NKF1 404 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 PDZK1P1A8MUH7 402 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SF3B1O75533 1304 aaKnown RBP eCLIP7.53□□□□□ -1.21e-7■■■■■ 55.1
SSR1-201ENST00000244763 NFASCO94856 1347 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 SNUPNO95149 360 aaKnown RBP7.53□□□□□ -1.2
SSR1-201ENST00000244763 SGPL1O95470 568 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 INSCQ1MX18 579 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 ARMC12Q5T9G4 340 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 LONP2Q86WA8 852 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 TC2NQ8N9U0 490 aa7.53□□□□□ -1.2
SSR1-201ENST00000244763 POLR1EQ9GZS1 481 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms