RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SEL1L2Q5TEA6 688 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 RNF207Q6ZRF8 634 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 ARHGAP36Q6ZRI8 547 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 OVCH1Q7RTY7 1134 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 YTHDF3Q7Z739 585 aaKnown RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 HOOK3Q86VS8 718 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 AFAP1L2Q8N4X5 818 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 SH2D3CQ8N5H7 860 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CISD2Q8N5K1 135 aaKnown RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 UBR7Q8N806 425 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 FBXL13Q8NEE6 735 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 SLC20A1Q8WUM9 679 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 ALG3Q92685 438 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CD101Q93033 1021 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NT5C1BQ96P26 610 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CEP89Q96ST8 783 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 MTFR1LQ9H019 292 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NEUROG2Q9H2A3 272 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CDIP1Q9H305 208 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 CNOT10Q9H9A5 744 aaKnown RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 KIAA1586Q9HCI6 787 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 RAVER2Q9HCJ3 691 aaKnown RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 ZDHHC18Q9NUE0 388 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.08
CXCR4-201ENST00000241393 MTUS1Q9ULD2 1270 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 PCDHA10Q9Y5I2 948 aa8.34□□□□□ -1.08
CXCR4-201ENST00000241393 NOTOA8MTQ0 251 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 MYO1FO00160 1098 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ADRB2P07550 413 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 GLI4P10075 376 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ADSSP30520 456 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 GJA4P35212 333 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 FNTAP49354 379 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 PEX5P50542 639 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 PDE6CP51160 858 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ERVFC1P60507 584 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 FMO1Q01740 532 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 FAPQ12884 760 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 STRN3Q13033 797 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 UGCGQ16739 394 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 FAM102BQ5T8I3 360 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ARHGEF16Q5VV41 709 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 RNF219Q5W0B1 726 aaPredicted RBP8.33□□□□□ -1.08
CXCR4-201ENST00000241393 KCTD16Q68DU8 428 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 PPP1R2P3Q6NXS1 205 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ABHD17CQ6PCB6 329 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 MAEAQ7L5Y9 396 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ARMC9Q7Z3E5 817 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 DDX42Q86XP3 938 aaKnown RBP eCLIP8.33□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF677Q86XU0 584 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 C10orf67Q8IYJ2 551 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 CPXCR1Q8N123 301 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 UBLCP1Q8WVY7 318 aaPredicted RBP8.33□□□□□ -1.08
CXCR4-201ENST00000241393 MAIP1Q8WWC4 291 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 SLCO2A1Q92959 643 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 C12orf42Q96LP6 360 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 PCDHB18PQ96TA0 734 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 TMEM109Q9BVC6 243 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 KMT5AQ9NQR1 393 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 RAB20Q9NX57 234 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 SLC12A6Q9UHW9 1150 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 CNOT7Q9UIV1 285 aaKnown RBP8.33□□□□□ -1.08
CXCR4-201ENST00000241393 PCDHA3Q9Y5H8 950 aa8.33□□□□□ -1.08
CXCR4-201ENST00000241393 DENND3A2RUS2 1198 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 OR14I1A6ND48 311 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 TISP43B9A030 160 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 VWA5AO00534 786 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 ATP2A1O14983 1001 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 ATP9AO75110 1047 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 SGPL1O95470 568 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 FAM107AO95990 144 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 MSL3P1P0C860 447 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 MYBL1P10243 752 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 CYP11B1P15538 503 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 DPEP1P16444 411 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 KRT15P19012 456 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 COMTP21964 271 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 BPIFB4P59827 614 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 CYP24A1Q07973 514 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PRPF4BQ13523 1007 aaKnown RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 ACAD10Q6JQN1 1059 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 ANO5Q75V66 913 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 TADA2BQ86TJ2 420 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 CBWD2Q8IUF1 395 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 GPD1LQ8N335 351 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PRELID2Q8N945 189 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 UHMK1Q8TAS1 419 aaKnown RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PIP4K2CQ8TBX8 421 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF564Q8TBZ8 553 aaPredicted RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PGM2Q96G03 612 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 TAOK3Q9H2K8 898 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PABPC3Q9H361 631 aaKnown RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 PLEKHA4Q9H4M7 779 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 RPAP3Q9H6T3 665 aaPredicted RBP8.32□□□□□ -1.08
CXCR4-201ENST00000241393 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
CXCR4-201ENST00000241393 MTRF1LQ9UGC7 380 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms