RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 HBS1LQ9Y450 684 aaKnown RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 HMX2A2RU54 273 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SPECC1L-ADORA2AF8WAN1 911 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 TSPAN1O60635 241 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SNNO75324 88 aaPredicted RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 TFE3P19532 575 aaPredicted RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 CNTFP26441 200 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 RAP1GDS1P52306 607 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SLC10A2Q12908 348 aaPredicted RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 Q3C1V9 767 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 ARCQ7LC44 396 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 PPFIBP2Q8ND30 876 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 AP4E1Q9UPM8 1137 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 TBX10O75333 385 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 ATP5BP06576 529 aaKnown RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 PTPN9P43378 593 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 ALDH18A1P54886 795 aaKnown RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 KDSRQ06136 332 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SEMA5AQ13591 1074 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 TBCCQ15814 346 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 CASC4Q6P4E1 433 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 LINC01465Q8N7H1 131 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SCG3Q8WXD2 468 aaKnown RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 THAP1Q9NVV9 213 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 KAT6AQ92794 2004 aa19.34■□□□□ 0.69
CPSF3-201ENST00000238112 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
CPSF3-201ENST00000238112 SKIP12755 728 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 GRIA1P42261 906 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.69
CPSF3-201ENST00000238112 C6orf163Q5TEZ5 329 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 KYAT3Q6YP21 454 aaKnown RBP19.33■□□□□ 0.69
CPSF3-201ENST00000238112 TIFABQ6ZNK6 161 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 ZCCHC23Q6ZST2 131 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 DENND5BQ6ZUT9 1274 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 RBM15BQ8NDT2 890 aaKnown RBP19.33■□□□□ 0.69
CPSF3-201ENST00000238112 NRG4Q8WWG1 115 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 RBPJLQ9UBG7 517 aa19.33■□□□□ 0.69
CPSF3-201ENST00000238112 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.33■□□□□ 0.69
CPSF3-201ENST00000238112 CIB2O75838 187 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 IRX4P78413 519 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 WASHC5Q12768 1159 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 DNAL1Q4LDG9 190 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 C7orf31Q8N865 590 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 OR6B3Q8NGW1 331 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 CSPG4P5Q96PW8 444 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 C20orf27Q9GZN8 174 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 MOCS1Q9NZB8 636 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 ZNF212Q9UDV6 495 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 LRCH1Q9Y2L9 728 aa19.33■□□□□ 0.68
CPSF3-201ENST00000238112 GRM5P41594 1212 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 MXRA7P84157 204 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 ARHGAP1Q07960 439 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 LAMC2Q13753 1193 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
CPSF3-201ENST00000238112 SCUBE1Q8IWY4 988 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 ADGRF2Q8IZF7 708 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 CLEC4CQ8WTT0 213 aa19.32■□□□□ 0.68
CPSF3-201ENST00000238112 TFB1MQ8WVM0 346 aaKnown RBP19.32■□□□□ 0.68
CPSF3-201ENST00000238112 KCTD15Q96SI1 283 aaPredicted RBP19.32■□□□□ 0.68
CPSF3-201ENST00000238112 WDR27A2RRH5 827 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 ASB14A6NK59 587 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 GABBR2O75899 941 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 TOP3BO95985 862 aaKnown RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 SERPINA6P08185 405 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 AP1B1Q10567 949 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 DBN1Q16643 649 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 FASTKD1Q53R41 847 aaKnown RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 RFX8Q6ZV50 586 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 CYS1Q717R9 158 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 WDR75Q8IWA0 830 aaKnown RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 HTR3CQ8WXA8 447 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 CDKL2Q92772 493 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 ATP2A3Q93084 1043 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 DTLQ9NZJ0 730 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 F5H423 210 aaPredicted RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 F8W8V4 182 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 PPEF2O14830 753 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 MAP3K7O43318 606 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 AMPD1P23109 780 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 FDFT1P37268 417 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 IREB2P48200 963 aaKnown RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 IRGCQ6NXR0 463 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 MTHFD1LQ6UB35 978 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 SLC26A9Q7LBE3 791 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 NET1Q7Z628 596 aaPredicted RBP19.31■□□□□ 0.68
CPSF3-201ENST00000238112 FBXO27Q8NI29 283 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 SIKE1Q9BRV8 207 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 CCDC106Q9BWC9 280 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 MAGEB5Q9BZ81 275 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 SLC24A3Q9HC58 644 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 MORF4L1Q9UBU8 362 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 ANGPTL2Q9UKU9 493 aa19.31■□□□□ 0.68
CPSF3-201ENST00000238112 DPPA5A6NC42 116 aa19.3■□□□□ 0.68
CPSF3-201ENST00000238112 TM7SF2O76062 418 aa19.3■□□□□ 0.68
CPSF3-201ENST00000238112 LINGO3P0C6S8 592 aa19.3■□□□□ 0.68
CPSF3-201ENST00000238112 ZNF286BP0CG31 522 aa19.3■□□□□ 0.68
CPSF3-201ENST00000238112 LCP1P13796 627 aa19.3■□□□□ 0.68
CPSF3-201ENST00000238112 TRMT5Q32P41 509 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms