RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TGFBIQ15582 683 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ZCCHC23Q6ZST2 131 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 NEK6Q9HC98 313 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PRR23D1E9PI22 279 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 H0YCG3 227 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 DENRO43583 198 aaKnown RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PRR23D2P0DMB1 279 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 BMP3P12645 472 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 RXRGP48443 463 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TMEM35BQ8NCS4 154 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 CACNA2D2Q9NY47 1150 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TMEM9Q9P0T7 183 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PACSIN3Q9UKS6 424 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TTC34A8MYJ7 566 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 MED7O43513 233 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 CLPXO76031 633 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 CCNE2O96020 404 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 APRTP07741 180 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 IL32P24001 234 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 THOP1P52888 689 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 DYNLL1P63167 89 aaKnown RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TRAP1Q12931 704 aaKnown RBP13.22□□□□□ -0.29
VAMP4-201ENST00000236192 SLC9A4Q6AI14 798 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ZHX1-C8orf76Q96EF9 292 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 ING3Q9NXR8 418 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 N6AMT1Q9Y5N5 214 aa13.22□□□□□ -0.29
VAMP4-201ENST00000236192 TET3O43151 1660 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 GLI2P10070 1586 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 EIF3FO00303 357 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 SPRP35270 261 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 SEPHS1P49903 392 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 UBE2SQ16763 222 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 Q6ZNX1 250 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 PALB2Q86YC2 1186 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 DDIASQ8IXT1 998 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 LILRB4Q8NHJ6 448 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 CPA5Q8WXQ8 436 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 NUAK2Q9H093 628 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 GANQ9H2C0 597 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 TDP2O95551 362 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 TSHRP16473 764 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 NCSTNQ92542 709 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 FAR2Q96K12 515 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 ASNSD1Q9NWL6 643 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 EHD3Q9NZN3 535 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 VTI1BQ9UEU0 232 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 IPO11Q9UI26 975 aaKnown RBP13.21□□□□□ -0.29
VAMP4-201ENST00000236192 V9GYQ6 96 aa13.21□□□□□ -0.29
VAMP4-201ENST00000236192 PTGES3LE9PB15 166 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.3
VAMP4-201ENST00000236192 PRDX6P30041 224 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 POTEGQ6S5H5 508 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM126BQ8IUX1 230 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 MED30Q96HR3 178 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 MTFR1LQ9H019 292 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 SP140LQ9H930 580 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 COG4Q9H9E3 785 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 LRRIQ1Q96JM4 1722 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 KCNN4O15554 427 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 PDZK1Q5T2W1 519 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.3
VAMP4-201ENST00000236192 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.3
VAMP4-201ENST00000236192 FRMD7Q6ZUT3 714 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 SLC22A16Q86VW1 577 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 MCFD2Q8NI22 146 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 DHX38Q92620 1227 aaKnown RBP13.21□□□□□ -0.3
VAMP4-201ENST00000236192 MAGEE1Q9HCI5 957 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 TMEM260Q9NX78 707 aa13.21□□□□□ -0.3
VAMP4-201ENST00000236192 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.3
VAMP4-201ENST00000236192 ABCA8O94911 1581 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 PRKD3O94806 890 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ADSLP30566 484 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 CLK3P49761 638 aaKnown RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 COBLL1Q53SF7 1204 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 C16orf46Q6P387 395 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
VAMP4-201ENST00000236192 ZNF560Q96MR9 790 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 KMOO15229 486 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 SLC4A1P02730 911 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 YES1P07947 543 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 NR4A1P22736 598 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 GNA15P30679 374 aa13.2□□□□□ -0.3
VAMP4-201ENST00000236192 GP5P40197 560 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms