RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PKN1Q16512 942 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 ACTR8Q9H981 624 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 KBTBD4Q9NVX7 518 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 TRPC4Q9UBN4 977 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 POLG2Q9UHN1 485 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 SESN1Q9Y6P5 492 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 PTPRUQ92729 1446 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 ZNF286BP0CG31 522 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 CXCL8P10145 99 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 MSH3P20585 1137 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 KRT20P35900 424 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 GJC2Q5T442 439 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-201ENST00000230538 MTSS1LQ765P7 747 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 OR8H2Q8N162 312 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 LPCAT1Q8NF37 534 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 CENPTQ96BT3 561 aa11.85□□□□□ -0.51
LAMA4-201ENST00000230538 PRMT6Q96LA8 375 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-201ENST00000230538 DDX43Q9NXZ2 648 aaKnown RBP11.85□□□□□ -0.51
LAMA4-201ENST00000230538 A0A087WZ62 844 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 MEI4A8MW99 385 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 E7ENQ6 273 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ATP6V1G2O95670 118 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CCDC157Q569K6 752 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 GRTP1Q5TC63 336 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 DPP10Q8N608 796 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 SERAC1Q96JX3 654 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 MAGEB10Q96LZ2 347 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CIPCQ9C0C6 399 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 NDUFA13Q9P0J0 144 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 IFRD1O00458 451 aaPredicted RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ACADMP11310 421 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 FEN1P39748 380 aaKnown RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 POU6F1Q14863 301 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ILDR2Q71H61 639 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 C4orf19Q8IY42 314 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 PPP1R14AQ96A00 147 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CCDC3Q9BQI4 270 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 DCLRE1BQ9H816 532 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 UTP6Q9NYH9 597 aaKnown RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 PDE5AO76074 875 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 WEE1P30291 646 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ALDH9A1P49189 494 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 SLC26A2P50443 739 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ZBTB49Q6ZSB9 765 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 LRRN4CLQ8ND94 238 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 FBXO25Q8TCJ0 367 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 GMCL1Q96IK5 515 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 RBM22Q9NW64 420 aaKnown RBP eCLIP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 SNTG2Q9NY99 539 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 NCOA3Q9Y6Q9 1424 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 TRIM24O15164 1050 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 SPTLC1O15269 473 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 AKAP3O75969 853 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ITGB6P18564 788 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 IL5RAQ01344 420 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 C1DQ13901 141 aaKnown RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 TMEM26Q6ZUK4 368 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 C19orf60Q96EN9 201 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 C4BPBP20851 252 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CYP2A7P20853 494 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 PTPN4P29074 926 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CCR1P32246 355 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 RENBPP51606 427 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CCDC153Q494R4 210 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 FIG4Q92562 907 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CAVIN3Q969G5 261 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 CELF6Q96J87 481 aaKnown RBP11.84□□□□□ -0.51
LAMA4-201ENST00000230538 PCDH9Q9HC56 1237 aa11.84□□□□□ -0.51
LAMA4-201ENST00000230538 TMEM114B3SHH9 223 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FAM20BO75063 409 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 FKBP6O75344 327 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 KATNA1O75449 491 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ABCB1P08183 1280 aaPredicted RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TRIM25Q14258 630 aaKnown RBP11.83□□□□□ -0.52
LAMA4-201ENST00000230538 IZUMO2Q6UXV1 221 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ITIH5Q86UX2 942 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TXNRD3Q86VQ6 643 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 C19orf18Q8NEA5 215 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PHF21BQ96EK2 531 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TMEM79Q9BSE2 394 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 TRIM8Q9BZR9 551 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 DPY30Q9C005 99 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RXFP1Q9HBX9 757 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 PLA2G4CQ9UP65 541 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 RIPK2O43353 540 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 CD151P48509 253 aa11.83□□□□□ -0.52
LAMA4-201ENST00000230538 CRYMQ14894 314 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms