RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 SYT15Q9BQS2 421 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 ACBD6Q9BR61 282 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 NAT10Q9H0A0 1025 aaKnown RBP6.03□□□□□ -1.44
AFP-201ENST00000226359 ATXN3LQ9H3M9 355 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 SLC2A4RGQ9NR83 387 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 HCFC1R1Q9NWW0 138 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 DDX43Q9NXZ2 648 aaKnown RBP6.03□□□□□ -1.44
AFP-201ENST00000226359 GMIPQ9P107 970 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 CDH9Q9ULB4 789 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 CA14Q9ULX7 337 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 HPSEQ9Y251 543 aa6.03□□□□□ -1.44
AFP-201ENST00000226359 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 FAM237AA0A1B0GTK4 181 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 ANHXE9PGG2 379 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 GOLGA6L19H0YKK7 550 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 NCAM2O15394 837 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 DNAJC8O75937 253 aaPredicted RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 RHOBTB3O94955 611 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 FAM163BP0C2L3 166 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 CASP1P29466 404 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 MAGEA9P43362 315 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 SNRPNP63162 240 aaKnown RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 SLC7A5Q01650 507 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 PRKCQQ04759 706 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 MLF2Q15773 248 aaPredicted RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 ZNF667Q5HYK9 610 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 C1orf228Q6PIY5 440 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 LRFN4Q6PJG9 635 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 INTS8Q75QN2 995 aaKnown RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 SCN4BQ8IWT1 228 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 FAM186BQ8IYM0 893 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 GUF1Q8N442 669 aaKnown RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 SLC44A3Q8N4M1 653 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 ATAD1Q8NBU5 361 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 OR6B3Q8NGW1 331 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 OR10T2Q8NGX3 314 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 GPBAR1Q8TDU6 330 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 CSGALNACT1Q8TDX6 532 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 DNASE1L2Q92874 299 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 SMARCD2Q92925 531 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 PSMG2Q969U7 264 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 ELSPBP1Q96BH3 223 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 ASIC4Q96FT7 647 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 MSANTD3Q96H12 275 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 IKZF4Q9H2S9 585 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 TBC1D17Q9HA65 648 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 AASDHPPTQ9NRN7 309 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 THG1LQ9NWX6 298 aaKnown RBP6.02□□□□□ -1.45
AFP-201ENST00000226359 KLHL3Q9UH77 587 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 L1RE1Q9UN81 338 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 MYH11P35749 1972 aa6.02□□□□□ -1.45
AFP-201ENST00000226359 CCDC163A0A0D9SF12 145 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 BECN2A8MW95 431 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 MAN2B1O00754 1011 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 PSMA7O14818 248 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 CETN3O15182 167 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 MAPK13O15264 365 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 TGFB1I1O43294 461 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 KLRC4O43908 158 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 SH3BP5O60239 455 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 N4BP1O75113 896 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 ECEL1O95672 775 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 TPM2P07951 284 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 HAPLN1P10915 354 aaPredicted RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 WARSP23381 471 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 NR2F2P24468 414 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 IGFBP6P24592 240 aaPredicted RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 GABRR2P28476 465 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 AVPR2P30518 371 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 PSMC2P35998 433 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 AVPR1AP37288 418 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 EPHA5P54756 1037 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 ENPEPQ07075 957 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 ZC3H12BQ5HYM0 836 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 GPR158Q5T848 1215 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 PKN3Q6P5Z2 889 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 PARM1Q6UWI2 310 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 ALYREFQ86V81 257 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 WFDC8Q8IUA0 241 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 DMRTC2Q8IXT2 367 aaPredicted RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 ZSCAN18Q8TBC5 510 aaPredicted RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 COG1Q8WTW3 980 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 RSAD2Q8WXG1 361 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 DDX1Q92499 740 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 TAF4BQ92750 862 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 TNIP3Q96KP6 325 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 CEP295NLQ96MC4 621 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 MED10Q9BTT4 135 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 PI4K2AQ9BTU6 479 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 TRMT61BQ9BVS5 477 aaKnown RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 KIF9Q9HAQ2 790 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 MAGED2Q9UNF1 606 aaPredicted RBP6.01□□□□□ -1.45
AFP-201ENST00000226359 BDP1A6H8Y1 2624 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 CITO14578 2027 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 CCDC189A1A4V9 331 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 A8MXQ7 604 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 ZNF263O14978 683 aa6.01□□□□□ -1.45
AFP-201ENST00000226359 NARSO43776 548 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms