RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 FAM172AQ8WUF8 416 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 TSPAN18Q96SJ8 248 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 DHX35Q9H5Z1 703 aaKnown RBP12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 CRTAC1Q9NQ79 661 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 IRAK4Q9NWZ3 460 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 ZNF148Q9UQR1 794 aa12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.15□□□□□ -0.46
TNFAIP1-201ENST00000226225 PAPSS1O43252 624 aaPredicted RBP12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 SETSIPP0DME0 302 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 GJA8P48165 433 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 OGDHQ02218 1023 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLFN11Q7Z7L1 901 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 FAM35AQ86V20 835 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 NPAS4Q8IUM7 802 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 CRYBG2Q8N1P7 616 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 ADAM28Q9UKQ2 775 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 DSEQ9UL01 958 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 PCDHA3Q9Y5H8 950 aa12.15□□□□□ -0.47
TNFAIP1-201ENST00000226225 CITO14578 2027 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 SCN1AP35498 2009 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 LAMA2P24043 3122 aaKnown RBP12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 B4GALT3O60512 393 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 WARSP23381 471 aaKnown RBP12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC6A3Q01959 620 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 DDR2Q16832 855 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 CCDC33Q8N5R6 958 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 NACA2Q9H009 215 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 CDH9Q9ULB4 789 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 CES2O00748 559 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 MIPP30301 263 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 SULT1E1P49888 294 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 OVGP1Q12889 678 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 TXNRD3NBQ6F5E7 133 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC30A9Q6PML9 568 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 TMEM199Q8N511 208 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 UCMAQ8WVF2 138 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 TEKT4Q8WW24 435 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 DPF3Q92784 378 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 APBB2Q92870 758 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 UROC1Q96N76 676 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 TXLNGYQ9BZA5 131 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 OSBPL8Q9BZF1 889 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
TNFAIP1-201ENST00000226225 FAM187AA6NFU0 413 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 RASA4BC9J798 803 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 RASA4O43374 803 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SOAT2O75908 522 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ECEL1O95672 775 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 NEFHP12036 1026 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 KRT15P19012 456 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ACADSBP45954 432 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC11A1P49279 550 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 MCCD1P59942 119 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 LMNTD2Q8IXW0 634 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 DEFB106AQ8N104 65 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 GPR62Q9BZJ7 368 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 C12orf65Q9H3J6 166 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 RXFP1Q9HBX9 757 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 TTC7AQ9ULT0 858 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 A0A1B0GVG6 124 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 M0QYT0 321 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 CREB3O43889 395 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 PTGIRP43119 386 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 RIPK1Q13546 671 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 DHX34Q14147 1143 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 PRSS55Q6UWB4 352 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 C4orf50Q6ZRC1 276 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF365Q70YC5 407 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC13A5Q86YT5 568 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 C7orf61Q8IZ16 206 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SMARCD1Q96GM5 515 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 SAE1Q9UBE0 346 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 KRT7P08729 469 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 FOXN2P32314 431 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 COILP38432 576 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 PTP4A2Q12974 167 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 BLMHQ13867 455 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 VARS2Q5ST30 1063 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRAF7Q6Q0C0 670 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 MFSD7Q6UXD7 560 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZC3H18Q86VM9 953 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 DCP1BQ8IZD4 617 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 OR10T2Q8NGX3 314 aa12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
TNFAIP1-201ENST00000226225 DDX50Q9BQ39 737 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms