RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 MICAL2O94851 1124 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 PPIL2Q13356 520 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 PKN2Q16513 984 aaKnown RBP13.58□□□□□ -0.23
COL1A1-201ENST00000225964 NLRP9Q7RTR0 991 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 EPS8L3Q8TE67 593 aaKnown RBP13.58□□□□□ -0.23
COL1A1-201ENST00000225964 TRPC4APQ8TEL6 797 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 RHBGQ9H310 441 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 HMX1Q9NP08 348 aaPredicted RBP13.58□□□□□ -0.23
COL1A1-201ENST00000225964 PHTF1Q9UMS5 762 aa13.58□□□□□ -0.23
COL1A1-201ENST00000225964 OR56A5P0C7T3 313 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SERPINB1P30740 379 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 NR6A1Q15406 480 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 TAF13Q15543 124 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 RAD9BQ6WBX8 426 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 PRRG3Q9BZD7 231 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 PTPRHQ9HD43 1115 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 PLEKP08567 350 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 HSMCR30P0CW71 290 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 FLT3P36888 993 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 TYW3Q6IPR3 259 aaKnown RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SPOCD1Q6ZMY3 1216 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 CCNJLQ8IV13 435 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 EMC1Q8N766 993 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SMARCD1Q96GM5 515 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 C1QTNF7Q9BXJ2 289 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 KLHL28Q9NXS3 571 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 MOXD2PA6NHM9 499 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 THRAP10827 490 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 UMPSP11172 480 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 ATP6V1B1P15313 513 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SLC26A2P50443 739 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 TUBP50607 506 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 Q4G0T1 1027 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 SETMARQ53H47 684 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 DSG4Q86SJ6 1040 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 EPHX4Q8IUS5 362 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 GMCL1P1Q8NEA9 526 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 ZCCHC2Q9C0B9 1178 aaKnown RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 GTF3C4Q9UKN8 822 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 MYO3AQ8NEV4 1616 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 RAMP2O60895 175 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 RBP1P09455 135 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 INSRRP14616 1297 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-201ENST00000225964 ADORA2AP29274 412 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 MARC1Q5VT66 337 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 METTL7BQ6UX53 244 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 DNAJC16Q9Y2G8 782 aa13.58□□□□□ -0.24
COL1A1-201ENST00000225964 IGF2BP3O00425 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RTN3O95197 1032 aaPredicted RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 XRCC4Q13426 336 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CD163L1Q9NR16 1453 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 SREBF1P36956 1147 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 HERVK_113P62684 666 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 KLC1Q07866 573 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 OSCP1Q8WVF1 389 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PARVBQ9HBI1 364 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 A0A087X0T9 212 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RAD51BO15315 384 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RPN2P04844 631 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 TPH1P17752 444 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CRYMQ14894 314 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PGM5Q15124 567 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 ATG16L2Q8NAA4 619 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 ASZ1Q8WWH4 475 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 DNAJC9Q8WXX5 260 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 ANKS1AQ92625 1134 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 BCL2L14Q9BZR8 327 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 VTA1Q9NP79 307 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 TRIM66O15016 1216 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 BAIAP3O94812 1187 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 JAK1P23458 1154 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 HSPA13P48723 471 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 CCR4P51679 360 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
COL1A1-201ENST00000225964 DSG1Q02413 1049 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 COX10Q12887 443 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 GIT2Q14161 759 aa13.57□□□□□ -0.24
COL1A1-201ENST00000225964 PALB2Q86YC2 1186 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms