RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 REXO1L1PQ8IX06 675 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 MIER2Q8N344 545 aa18.97■□□□□ 0.63
CLIP2-201ENST00000223398 DRG1Q9Y295 367 aaKnown RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 USP15Q9Y4E8 981 aaPredicted RBP18.97■□□□□ 0.63
CLIP2-201ENST00000223398 SF3B1O75533 1304 aaKnown RBP eCLIP18.97■□□□□ 0.635e-6■■■■■ 114.9
CLIP2-201ENST00000223398 STAU1O95793 577 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 PRIM2P49643 509 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 RENBPP51606 427 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 MCL1Q07820 350 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 C10orf53Q8N6V4 93 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 GRIN3AQ8TCU5 1115 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 HAS1Q92839 578 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 TSEN34Q9BSV6 310 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 NCKAP1Q9Y2A7 1128 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 MAFO75444 373 aaPredicted RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 IGSF6O95976 241 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 DARSP14868 501 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 EFL1Q7Z2Z2 1120 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 SUSD6Q92537 303 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 KAT5Q92993 513 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 PLEKHA8Q96JA3 519 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 THUMPD3Q9BV44 507 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 ZNF556Q9HAH1 456 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 EIF3LQ9Y262 564 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 TRDMT1O14717 391 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 ATP5C1P36542 298 aaKnown RBP18.96■□□□□ 0.63
CLIP2-201ENST00000223398 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 LONP2Q86WA8 852 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 HTATIP2Q9BUP3 242 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 KCNMB3Q9NPA1 279 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 MOXD2PA6NHM9 499 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 F8W810 466 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 TIMM44O43615 452 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 FIGNQ5HY92 759 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 GPR152Q8TDT2 470 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 TMEM134Q9H6X4 195 aa18.96■□□□□ 0.63
CLIP2-201ENST00000223398 PAEPP09466 180 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 HDAC4P56524 1084 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CYTH1Q15438 398 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CACHD1Q5VU97 1274 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CES3Q6UWW8 571 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 TMCO5AQ8N6Q1 288 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ZNF473Q8WTR7 871 aaKnown RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 BTN2A2Q8WVV5 523 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ACP6Q9NPH0 428 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 YDJCA8MPS7 323 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ADCY6O43306 1168 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 PWP1Q13610 501 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CCDC85BQ15834 202 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 AGBL2Q5U5Z8 902 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CCDC149Q6ZUS6 474 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ZDHHC17Q8IUH5 632 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 EPN3Q9H201 632 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ASAH2Q9NR71 780 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 RRN3Q9NYV6 651 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 GNG14A0A1W2PPG7 69 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 HDCP19113 662 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CRY2Q49AN0 593 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ZNF333Q96JL9 665 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CCT8L2Q96SF2 557 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 DUSP9Q99956 384 aaKnown RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ILKAPQ9H0C8 392 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CDT1Q9H211 546 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 NCAM2O15394 837 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 GLRA3O75311 464 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 GRK4P32298 578 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 BCL2L1Q07817 233 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 PPP3CAQ08209 521 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 DMTNQ08495 405 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 MPP3Q13368 585 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 UGCGQ16739 394 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 PGS1Q32NB8 556 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 CCNJLQ8IV13 435 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 RIBC1Q8N443 379 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 HIPK3Q9H422 1215 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 TNFSF13BQ9Y275 285 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ASTN2O75129 1339 aaPredicted RBP18.95■□□□□ 0.62
CLIP2-201ENST00000223398 SPATA31C2B4DYI2 1134 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 MLNP12872 115 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ITGB5P18084 799 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 E2F4Q16254 413 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 RAP1GAP2Q684P5 730 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 PRR23CQ6ZRP0 262 aa18.95■□□□□ 0.62
CLIP2-201ENST00000223398 ADRB2P07550 413 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 SERPINB4P48594 390 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 PABPC1LQ4VXU2 614 aaKnown RBP18.94■□□□□ 0.62
CLIP2-201ENST00000223398 ZC3H12AQ5D1E8 599 aaKnown RBP18.94■□□□□ 0.62
CLIP2-201ENST00000223398 OTOAQ7RTW8 1153 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 B3GALNT2Q8NCR0 500 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 MAGED4Q96JG8 741 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 GID8Q9NWU2 228 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 NMRK1Q9NWW6 199 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 UBA2Q9UBT2 640 aaPredicted RBP18.94■□□□□ 0.62
CLIP2-201ENST00000223398 B2RBV5 119 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 NDUFV1P49821 464 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 C16orf89Q6UX73 402 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 HORMAD1Q86X24 394 aa18.94■□□□□ 0.62
CLIP2-201ENST00000223398 ECSITQ9BQ95 431 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms