RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 LILRB4Q8NHJ6 448 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 POMGNT1Q8WZA1 660 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 SHC3Q92529 594 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 ZFYVE28Q9HCC9 887 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 TMEM8AQ9HCN3 771 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 IFT52Q9Y366 437 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 HNRNPDLO14979 420 aaKnown RBP14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PRPF4O43172 522 aaKnown RBP eCLIP14.07□□□□□ -0.164e-7■■□□□ 12.4
GABPB1-201ENST00000220429 CYP26A1O43174 497 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 DNAJA2O60884 412 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 SULT1C4O75897 302 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 IRX4P78413 519 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 CDK16Q00536 496 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 CYP24A1Q07973 514 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 OVGP1Q12889 678 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 MMAAQ8IVH4 418 aaKnown RBP14.07□□□□□ -0.16
GABPB1-201ENST00000220429 FBXO27Q8NI29 283 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 ELMO3Q96BJ8 720 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 CCDC138Q96M89 665 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PALMDQ9NP74 551 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 ZMAT5Q9UDW3 170 aaKnown RBP14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PADI4Q9UM07 663 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 PCDHGA3Q9Y5H0 932 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 SCINQ9Y6U3 715 aa14.07□□□□□ -0.16
GABPB1-201ENST00000220429 CAPN8A6NHC0 703 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SUPT20HL2P0C7V6 817 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FGFR1P11362 822 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SLC18A1P54219 525 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 HADHBP55084 474 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TMED2Q15363 201 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CYP2A13Q16696 494 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SUPT20HL1Q3ZLR7 823 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TIGD2Q4W5G0 525 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TTC27Q6P3X3 843 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CCDC137Q6PK04 289 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 DLK2Q6UY11 383 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 MYO1HQ8N1T3 1032 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 POLR3FQ9H1D9 316 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FKBP14Q9NWM8 211 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 ARHGAP28Q9P2N2 729 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 KIAA1257Q9ULG3 409 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 ARIH1Q9Y4X5 557 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 THAP12O43422 761 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SIN3BO75182 1162 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SRGAP2CP0DJJ0 459 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SRGAP2BP0DMP2 458 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 MFAP3P55082 362 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CNTN2Q02246 1040 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TRIM71Q2Q1W2 868 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 OSTM1Q86WC4 334 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CPSF7Q8N684 471 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 POU5F2Q8N7G0 328 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 PRELID2Q8N945 189 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FBXL13Q8NEE6 735 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FOXD2O60548 495 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 DLATP10515 647 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 RPA3P35244 121 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 FMO1Q01740 532 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 RGS21Q2M5E4 152 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 DNAL1Q4LDG9 190 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 XKR3Q5GH77 459 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TREML2Q5T2D2 321 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 GJC2Q5T442 439 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SV2AQ7L0J3 742 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 TTC7BQ86TV6 843 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 GPD1LQ8N335 351 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SLC26A7Q8TE54 656 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CNBD2Q96M20 576 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SACM1LQ9NTJ5 587 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 RAB20Q9NX57 234 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 CHORDC1Q9UHD1 332 aaPredicted RBP14.06□□□□□ -0.16
GABPB1-201ENST00000220429 GNPTGQ9UJJ9 305 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 POU2F3Q9UKI9 436 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 DTNAQ9Y4J8 743 aa14.06□□□□□ -0.16
GABPB1-201ENST00000220429 SIP14410 1827 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 OTOFQ9HC10 1997 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 FAM58BPP0C7Q3 252 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GARTP22102 1010 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GPC5P78333 572 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 EMC2Q15006 297 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 TCEAL1Q15170 157 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 SLC1A5Q15758 541 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 AMIGO2Q86SJ2 522 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 ELMOD1Q8N336 334 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 GSTCDQ8NEC7 633 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 MAML1Q92585 1016 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
GABPB1-201ENST00000220429 NT5C1BQ96P26 610 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms